RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 METTL11BQ5VVY1 283 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 POMZP3Q6PJE2 187 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 TEX261Q6UWH6 196 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 OR1L3Q8NH93 324 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 ZNF519Q8TB69 540 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 UTP23Q9BRU9 249 aaKnown RBP15.3■□□□□ 0.04
TOM1-210ENST00000449058 ZNF436Q9C0F3 470 aaPredicted RBP15.3■□□□□ 0.04
TOM1-210ENST00000449058 OR10A4Q9H209 315 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 LMAN1LQ9HAT1 526 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 TAS2R10Q9NYW0 307 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 ING1Q9UK53 422 aaPredicted RBP15.3■□□□□ 0.04
TOM1-210ENST00000449058 U3KQ87 197 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 PCNX3Q9H6A9 2034 aa15.3■□□□□ 0.04
TOM1-210ENST00000449058 G3V3Q6 166 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 NPIPB7O75200 414 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 TMIGD3P0DMS9 266 aaPredicted RBP15.29■□□□□ 0.04
TOM1-210ENST00000449058 GP1BBP13224 206 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 HNRNPKP61978 463 aaKnown RBP eCLIP15.29■□□□□ 0.04
TOM1-210ENST00000449058 PLCXD2Q0VAA5 305 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 IKZF1Q13422 519 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 HLA-DQA1Q5Y7H0 255 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 LRRC69Q6ZNQ3 347 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 Q6ZTK2 550 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 KANSL1Q7Z3B3 1105 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 CARFQ8N187 725 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 DAZLQ92904 295 aaKnown RBP15.29■□□□□ 0.04
TOM1-210ENST00000449058 OMA1Q96E52 524 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 OR8B4Q96RC9 309 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 TBL1XR1Q9BZK7 514 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 NPDC1Q9NQX5 325 aaPredicted RBP15.29■□□□□ 0.04
TOM1-210ENST00000449058 STEAP1Q9UHE8 339 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 B9D1Q9UPM9 204 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 MTCH2Q9Y6C9 303 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 C11orf98E9PRG8 122 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 XKRYO14609 159 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 MAS1P04201 325 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 DNASE1P24855 282 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 OR3A3P47888 321 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 SELENOPP49908 381 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 PNLIPRP2P54317 469 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 RPL27P61353 136 aaKnown RBP15.29■□□□□ 0.04
TOM1-210ENST00000449058 PLA2G7Q13093 441 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 COL28A1Q2UY09 1125 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 LGALSLQ3ZCW2 172 aaPredicted RBP15.29■□□□□ 0.04
TOM1-210ENST00000449058 VWA2Q5GFL6 755 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 WDR38Q5JTN6 314 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 ZNF227Q86WZ6 799 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 SIX5Q8N196 739 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 ZNF441Q8N8Z8 693 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 METTL21AQ8WXB1 218 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 SORCS2Q96PQ0 1159 aa15.29■□□□□ 0.04
TOM1-210ENST00000449058 PRSS37A4D1T9 235 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ARPC1BO15143 372 aaKnown RBP15.28■□□□□ 0.04
TOM1-210ENST00000449058 SDC3O75056 442 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 SLC25A12O75746 678 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 SRFP11831 508 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 FBLP22087 321 aaKnown RBP15.28■□□□□ 0.04
TOM1-210ENST00000449058 DCTDP32321 178 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 OR1D5P58170 312 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 NXPH1P58417 271 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 CBFBQ13951 182 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 NSDHLQ15738 373 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ACKR1Q16570 336 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 NLRC3Q7RTR2 1065 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ZNF680Q8NEM1 530 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 OR1N1Q8NGS0 311 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 THRSPQ92748 146 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 DNAJA3Q96EY1 480 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 MED30Q96HR3 178 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ULBP3Q9BZM4 244 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 NOX3Q9HBY0 568 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ZNF304Q9HCX3 659 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 RP1P56715 2156 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 IGHV1OR21-1A0A087WYE8 117 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ARPC4-TTLL3A0A0A6YYG9 625 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 H0YC42 278 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 XRCC3O43542 346 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 DXOO77932 396 aaKnown RBP15.28■□□□□ 0.04
TOM1-210ENST00000449058 NUDT14O95848 222 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 NAT1P18440 290 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ABCD3P28288 659 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 MECP2P51608 486 aaKnown RBP15.28■□□□□ 0.04
TOM1-210ENST00000449058 POLR2HP52434 150 aaKnown RBP15.28■□□□□ 0.04
TOM1-210ENST00000449058 CFHR1Q03591 330 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 SLC17A1Q14916 467 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 CADM4Q8NFZ8 388 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ASB17Q8WXJ9 295 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ATOH1Q92858 354 aaPredicted RBP15.28■□□□□ 0.04
TOM1-210ENST00000449058 SLC25A36Q96CQ1 311 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 RADILQ96JH8 1075 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 CITED4Q96RK1 184 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 ELOVL3Q9HB03 270 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 DIABLOQ9NR28 239 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 VSX1Q9NZR4 365 aaPredicted RBP15.28■□□□□ 0.04
TOM1-210ENST00000449058 EYSQ5T1H1 3165 aa15.28■□□□□ 0.04
TOM1-210ENST00000449058 TMED7-TICAM2A0A0A6YYA0 188 aa15.27■□□□□ 0.04
TOM1-210ENST00000449058 IGLV1-36A0A0B4J1U3 117 aa15.27■□□□□ 0.04
TOM1-210ENST00000449058 SUSD5O60279 629 aa15.27■□□□□ 0.04
TOM1-210ENST00000449058 FADS1O60427 444 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms