RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 OR4C16Q8NGL9 310 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 OR13G1Q8NGZ3 307 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ACER1Q8TDN7 264 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 COMMD5Q9GZQ3 224 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 LRIT1Q9P2V4 623 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ATP7AQ04656 1500 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 QRICH2Q9H0J4 1663 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 DOCK6Q96HP0 2047 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ADCYAP1R1P41586 468 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 METAP1P53582 386 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 P2RX3P56373 397 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 CLDN8P56748 225 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 DOLPP1Q86YN1 238 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 GOT1L1Q8NHS2 421 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 C1QTNF2Q9BXJ5 285 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ANKRD60Q9BZ19 345 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 FAM198AQ9UFP1 575 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 RIMS3Q9UJD0 308 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 TCRBV21S2A2A0A5A6 115 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM221A6NGB7 291 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PRAMEF25A6NGN4 478 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 NEURL1O76050 574 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 CD80P33681 288 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF140P52738 457 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 STC1P52823 247 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF648Q5T619 568 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PRAMEF5Q5TYX0 476 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PRAMEF6Q5VXH4 476 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 MBLAC2Q68D91 279 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 RNASEKQ6P5S7 137 aaKnown RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 FCRLAQ7L513 359 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF34Q8IZ26 560 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 CDRT4Q8N9R6 151 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM230Q96A57 120 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 RBM14Q96PK6 669 aaKnown RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 HEMK1Q9Y5R4 338 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PRR36Q9H6K5 1346 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 KDM4FA0A1W2PPD8 638 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 NPIPB15A6NHN6 443 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 FAM159BA6NKW6 160 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 WNT11O96014 354 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 HOXB2P14652 356 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 VEGFAP15692 232 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PTNP21246 168 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 NXNL2Q5VZ03 156 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF787Q6DD87 383 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 GPR26Q8NDV2 337 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM184BQ9Y519 407 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.31□□□□□ -1.086e-7■■■■■ 32.6
NIPBL-202ENST00000448238 FAM183AA6NL82 134 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ID2Q02363 134 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 SLC35E4Q6ICL7 350 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 TFAP2EQ6VUC0 442 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 MMP21Q8N119 569 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 SLCO2A1Q92959 643 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 LPPQ93052 612 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ZMYND19Q96E35 227 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM208Q9BTX3 173 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 NSUN3Q9H649 340 aaKnown RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF395Q9H8N7 513 aaPredicted RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 DTLQ9NZJ0 730 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 NAT8BQ9UHF3 227 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 PIGLQ9Y2B2 252 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 HES2Q9Y543 173 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 CFAP20Q9Y6A4 193 aaKnown RBP8.31□□□□□ -1.08
NIPBL-202ENST00000448238 NDUFS8O00217 210 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 AHSGP02765 367 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 CHRM2P08172 466 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ITGAMP11215 1152 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 MMP15P51511 669 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 SUOXP51687 545 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 OR8J2Q8NGG1 315 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 CAPNS2Q96L46 248 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF835Q9Y2P0 537 aa8.31□□□□□ -1.08
NIPBL-202ENST00000448238 GDI1P31150 447 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 BTG1P62324 171 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 RPL30P62888 115 aaKnown RBP8.3□□□□□ -1.08
NIPBL-202ENST00000448238 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
NIPBL-202ENST00000448238 TMEM115Q12893 351 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-202ENST00000448238 ZNF678Q5SXM1 525 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 UBALD2Q8IYN6 164 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 OR1N2Q8NGR9 330 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 ULBP3Q9BZM4 244 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 OBP2AQ9NY56 170 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 FZD1Q9UP38 647 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 HSD17B1P14061 328 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 PJVKQ0ZLH3 352 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 PM20D1Q6GTS8 502 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 PAQR6Q6TCH4 344 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 RTN4IP1Q8WWV3 396 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-202ENST00000448238 SLC39A7Q92504 469 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 PCED1BQ96HM7 432 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 SEC22AQ96IW7 307 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 DHRS4Q9BTZ2 278 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 MARCH4Q9P2E8 410 aaPredicted RBP8.3□□□□□ -1.08
NIPBL-202ENST00000448238 CCL22O00626 93 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 PIAS2O75928 621 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 PIGPP57054 158 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 CTBSQ01459 385 aa8.3□□□□□ -1.08
NIPBL-202ENST00000448238 NPY5RQ15761 445 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms