RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 TACSTD2P09758 323 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 OR8G3PP0DMU2 310 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 APEHP13798 732 aaKnown RBP13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 IGFBP5P24593 272 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ZNF133P52736 654 aaPredicted RBP13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 PIN1Q13526 163 aaPredicted RBP13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 RIN1Q13671 783 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 HIST3H2AQ7L7L0 130 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 NANOGNBQ7Z5D8 188 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ARIH2OSQ8N7S6 290 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 TMEM255BQ8WV15 326 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 HIST1H2ACQ93077 130 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 C20orf141Q9NUB4 165 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ZNF446Q9NWS9 450 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LPAR3Q9UBY5 353 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 RIMS3Q9UJD0 308 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FBXL3Q9UKT7 428 aa13.64□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LOC100653049A0A140TA62 436 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SH3PXD2BA1X283 911 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 CENPBD1B2RD01 187 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 BLOC1S5-TXNDC5H3BN57 136 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SHOX2O60902 331 aaPredicted RBP13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LILRA1O75019 489 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 KRT34O76011 436 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 OR7A10O76100 309 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 IGHG1P01857 330 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 F13BP05160 661 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 QDPRP09417 244 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 THRBP10828 461 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 UMPSP11172 480 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FUT1P19526 365 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 OR1E2P47887 323 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SF3A3Q12874 501 aaKnown RBP eCLIP13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MAPRE2Q15555 327 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MMEL1Q495T6 779 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 NRN1LQ496H8 165 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FAM166AQ6J272 317 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 DEF8Q6ZN54 512 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LRP11Q86VZ4 500 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 TMEM239Q8WW34 195 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ASB10Q8WXI3 467 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MCHR2Q969V1 340 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ZNF347Q96SE7 839 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SH3GL3Q99963 347 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 BEX2Q9BXY8 128 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 CCDC134Q9H6E4 229 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 DYNLRB1Q9NP97 96 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SPEF1Q9Y4P9 236 aa13.63□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LOC100289279A0A1B0GTE1 492 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 NPIPB13A6NJU9 1138 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 NPIPB4C9JG80 1138 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 IFNA14P01570 189 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ERCC1P07992 297 aaPredicted RBP13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 FUT4P22083 530 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 KDELR2P33947 212 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 AQP2P41181 271 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 TAS2R41P59536 307 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 IQCCQ4KMZ1 466 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 CYBRD1Q53TN4 286 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ELFN2Q5R3F8 820 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 C10orf128Q5T292 105 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ARMC4Q5T2S8 1044 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 PAQR4Q8N4S7 273 aaPredicted RBP13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 PCYOX1LQ8NBM8 494 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 NOXO1Q8NFA2 376 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 OR4K5Q8NGD3 323 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MOSPD2Q8NHP6 518 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 UBASH3BQ8TF42 649 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 NMD3Q96D46 503 aaKnown RBP13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SGTBQ96EQ0 304 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 TPK1Q9H3S4 243 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MYEF2Q9P2K5 600 aaKnown RBP13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 REV1Q9UBZ9 1251 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SLC7A8Q9UHI5 535 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 KCNS2Q9ULS6 477 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 A4GNTQ9UNA3 340 aa13.62□□□□□ -0.23
SPTLC1P1-201ENST00000447199 A0A1W2PRG6 482 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LRP5LA4QPB2 252 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LYNX1G3V0Z9 82 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 M0R233 179 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SLC22A2O15244 555 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 ENTPD5O75356 428 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 TRMUO75648 421 aaKnown RBP13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 LYNX1P0DP58 116 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 IL2RGP31785 369 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 THBS2P35442 1172 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 RPS23P62266 143 aaKnown RBP13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 GALK2Q01415 458 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 DPPA2Q7Z7J5 298 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 PHC2Q8IXK0 858 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SYT14Q8NB59 555 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 OR2T12Q8NG77 320 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 HPS1Q92902 700 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 C1orf159Q96HA4 380 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SYT3Q9BQG1 590 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 SHARPINQ9H0F6 387 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 MS4A5Q9H3V2 200 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 INIPQ9NRY2 104 aa13.61□□□□□ -0.23
SPTLC1P1-201ENST00000447199 GID8Q9NWU2 228 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms