RNA–Protein interactions for RNA: ENST00000444040.6

SHQ1-202, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2

Gene SHQ1, Length 2,844 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-202ENST00000444040 COMMD4Q9H0A8 199 aa14.46□□□□□ -0.09
SHQ1-202ENST00000444040 EMC3Q9P0I2 261 aa14.46□□□□□ -0.09
SHQ1-202ENST00000444040 CA14Q9ULX7 337 aa14.46□□□□□ -0.09
SHQ1-202ENST00000444040 FKBP7Q9Y680 259 aa14.46□□□□□ -0.09
SHQ1-202ENST00000444040 COL5A1P20908 1838 aaPredicted RBP14.46□□□□□ -0.1
SHQ1-202ENST00000444040 PLGP00747 810 aaPredicted RBP14.46□□□□□ -0.1
SHQ1-202ENST00000444040 MAS1P04201 325 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 TMIGD3P0DMS9 266 aaPredicted RBP14.46□□□□□ -0.1
SHQ1-202ENST00000444040 GP1BBP13224 206 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 PLA2G7Q13093 441 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 TDGQ13569 410 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 ACKR1Q16570 336 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 WDR38Q5JTN6 314 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 OTPQ5XKR4 325 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 OLFML2AQ68BL7 652 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 FDX2Q6P4F2 183 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 ADGRG3Q86Y34 549 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 ZNF417Q8TAU3 575 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 METTL21AQ8WXB1 218 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 SLC25A36Q96CQ1 311 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 VN1R1Q9GZP7 353 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 SEMA5BQ9P283 1151 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 NPTNQ9Y639 398 aa14.46□□□□□ -0.1
SHQ1-202ENST00000444040 A0A1B0GVI7 797 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 PRSS37A4D1T9 235 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 ADAM10O14672 748 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 FADS1O60427 444 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 TAS2R20P59543 309 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 RPL27P61353 136 aaKnown RBP14.45□□□□□ -0.1
SHQ1-202ENST00000444040 RASGEF1BQ0VAM2 473 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 CBFBQ13951 182 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 LRRN1Q6UXK5 716 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 ATOH1Q92858 354 aaPredicted RBP14.45□□□□□ -0.1
SHQ1-202ENST00000444040 OR8B4Q96RC9 309 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 ULBP3Q9BZM4 244 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 PCED1AQ9H1Q7 454 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 DLL4Q9NR61 685 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 PRUNE2Q8WUY3 3088 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 H0YC42 278 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 XKRYO14609 159 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 SUSD5O60279 629 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 SLC25A12O75746 678 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 DXOO77932 396 aaKnown RBP14.45□□□□□ -0.1
SHQ1-202ENST00000444040 LDOC1O95751 146 aaPredicted RBP14.45□□□□□ -0.1
SHQ1-202ENST00000444040 TGM6O95932 706 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 CSF2RBP32927 897 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 CSNK1EP49674 416 aaKnown RBP14.45□□□□□ -0.1
SHQ1-202ENST00000444040 INSM1Q01101 510 aaPredicted RBP14.45□□□□□ -0.1
SHQ1-202ENST00000444040 ODF4Q2M2E3 257 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 C1QTNF12Q5T7M4 302 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 LUZP2Q86TE4 346 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 PLXDC1Q8IUK5 500 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 SLC41A2Q96JW4 573 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 COPS7AQ9UBW8 275 aa14.45□□□□□ -0.1
SHQ1-202ENST00000444040 TMED7-TICAM2A0A0A6YYA0 188 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 ANXA2P2A6NMY6 339 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 ACOT7O00154 380 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 NUDT21O43809 227 aaKnown RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 KHDRBS3O75525 346 aaKnown RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 ANXA2P07355 339 aaKnown RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 POLR2HP52434 150 aaKnown RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 SCAND1P57086 179 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 MEP1BQ16820 701 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 C1orf189Q5VU69 101 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 SLC29A4Q7RTT9 530 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 GPR119Q8TDV5 335 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 PHF7Q9BWX1 381 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 ELOVL3Q9HB03 270 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 MRPL22Q9NWU5 206 aaKnown RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 VSX1Q9NZR4 365 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 MKL2Q9ULH7 1088 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 TMED7Q9Y3B3 224 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 IGLV1-36A0A0B4J1U3 117 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 H3BSH0 61 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 SSNA1O43805 119 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 PRAF2O60831 178 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 TPPPO94811 219 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 CFPP27918 469 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 VEGFCP49767 419 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 SLC17A1Q14916 467 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 ZBTB37Q5TC79 503 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 ARHGAP40Q5TG30 622 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 Q6ZTK2 550 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 GLB1L2Q8IW92 636 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 SIX5Q8N196 739 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 OR8K3Q8NH51 312 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 DACT3Q96B18 629 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 FOXN4Q96NZ1 517 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 OR10A4Q9H209 315 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 TXNIPQ9H3M7 391 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 HEXA-AS1Q9H8Q6 139 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 TAS2R10Q9NYW0 307 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 STEAP1Q9UHE8 339 aa14.44□□□□□ -0.1
SHQ1-202ENST00000444040 ELF5Q9UKW6 265 aaPredicted RBP14.44□□□□□ -0.1
SHQ1-202ENST00000444040 A0A1B0GX78 115 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 A8MVM7 634 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 GLSO94925 669 aaPredicted RBP14.43□□□□□ -0.1
SHQ1-202ENST00000444040 DCTDP32321 178 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 PER3P56645 1201 aa14.43□□□□□ -0.1
SHQ1-202ENST00000444040 TEX30Q5JUR7 227 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms