RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 LTB4RQ15722 352 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 INAQ16352 499 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SNAPC1Q16533 368 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DECR1Q16698 335 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MEP1BQ16820 701 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 C2orf68Q2NKX9 166 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRIM16LQ309B1 348 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ARHGAP11BQ3KRB8 267 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF718Q3SXZ3 478 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF404Q494X3 552 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DEFB134Q4QY38 66 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 KRTCAP3Q53RY4 240 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 LCE1EQ5T753 118 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TYW3Q6IPR3 259 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACSM5Q6NUN0 579 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 NIPAL1Q6NVV3 410 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZCCHC12Q6PEW1 402 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 C19orf48Q6RUI8 117 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRSS57Q6UWY2 283 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC36A4Q6YBV0 504 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF730Q6ZMV8 503 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF836Q6ZNA1 936 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 GDPGP1Q6ZNW5 385 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 RASSF6Q6ZTQ3 369 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PLEKHM3Q6ZWE6 761 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TAF8Q7Z7C8 310 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ABI3BPQ7Z7G0 1075 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 HMGN2P46Q86SG4 172 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF554Q86TJ5 538 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 COMTD1Q86VU5 262 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 VRK2Q86Y07 508 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR4N5Q8IXE1 308 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC34A3Q8N130 599 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CYP4Z2PQ8N1L4 340 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CA13Q8N1Q1 262 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR2L13Q8N349 312 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 RFLNBQ8N5W9 214 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PARP16Q8N5Y8 322 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DRAXINQ8NBI3 349 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MINDY2Q8NBR6 621 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MORN4Q8NDC4 146 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PROKR2Q8NFJ6 384 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR7G2Q8NG99 324 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR9Q1Q8NGQ5 310 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR10G6Q8NH81 332 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 RPLP0P6Q8NHW5 317 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PIGXQ8TBF5 258 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SETD6Q8TBK2 473 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TEX47Q8TBZ9 253 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 FAM3CQ92520 227 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CDS1Q92903 461 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 RERGQ96A58 199 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OTUB1Q96FW1 271 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC41A3Q96GZ6 507 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DACH2Q96NX9 599 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MS4A4EQ96PG1 132 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC38A2Q96QD8 506 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR1F2PQ96R84 312 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR5M11Q96RB7 305 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MGLLQ99685 303 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MCHR1Q99705 422 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MND1Q9BWT6 205 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TSSK6Q9BXA6 273 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRRG3Q9BZD7 231 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 RTN4RQ9BZR6 473 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 POLR2J2Q9GZM3 115 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLIRPQ9GZT3 109 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 NXF2Q9GZY0 626 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR51E2Q9H255 320 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PPIL3Q9H2H8 161 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC38A1Q9H2H9 487 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PIGMQ9H3S5 423 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DSN1Q9H410 356 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PIGUQ9H490 435 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ARMC7Q9H6L4 198 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 EVA1AQ9H8M9 152 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 LYRM4Q9HD34 91 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 EQTNQ9NQ60 294 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CTPS2Q9NRF8 586 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MAN2C1Q9NTJ4 1040 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 HRASLS2Q9NWW9 162 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 RHBDL2Q9NX52 303 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 ANKRD10Q9NXR5 420 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 TVP23BQ9NYZ1 205 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 COQ3Q9NZJ6 369 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DNAJC27Q9NZQ0 273 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 CCDC59Q9P031 241 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DAPK2Q9UIK4 370 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PILRAQ9UKJ1 303 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 MMP17Q9ULZ9 603 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 DIMT1Q9UNQ2 313 aaKnown RBP3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 PEX16Q9Y5Y5 336 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC22A7Q9Y694 548 aa3.09□□□□□ -1.91
HMGB3P11-201ENST00000440127 KIAA1549LQ6ZVL6 1849 aa3.09□□□□□ -1.92
HMGB3P11-201ENST00000440127 DENND4AQ7Z401 1863 aa3.09□□□□□ -1.92
HMGB3P11-201ENST00000440127 KIF26AQ9ULI4 1882 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 IGLV5-37A0A075B6J1 123 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 SPTY2D1-AS1A0A0U1RR47 76 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 PNMA8CA0A1B0GUJ8 204 aa3.08□□□□□ -1.92
HMGB3P11-201ENST00000440127 FUOMA2VDF0 154 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms