RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 ACKR4Q9NPB9 350 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 QPCTLQ9NXS2 382 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 HAO2Q9NYQ3 351 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 STUB1Q9UNE7 303 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SSR3Q9UNL2 185 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZNF835Q9Y2P0 537 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CAB39Q9Y376 341 aaPredicted RBP13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CORINQ9Y5Q5 1042 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 DOPEY1Q5JWR5 2465 aa13.02□□□□□ -0.33
TNFRSF1A-204ENST00000440083 PCNX1Q96RV3 2341 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 A0A087WZY1 265 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 A0A1B0GVC2 190 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ETV2O00321 342 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 AQP7O14520 342 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 XKRYO14609 159 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZIC3O60481 467 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TPOP07202 933 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SBK2P0C263 348 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CPEP16870 476 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 PSMA1P25786 263 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SRD5A2P31213 254 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 EIF1P41567 113 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CAPZA2P47755 286 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SLC25A1P53007 311 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 B3GALT5-AS1P59052 145 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TUBA1BP68363 451 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 GGTLC2Q14390 218 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SSX1Q16384 188 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 C3orf33Q6P1S2 294 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 B3GLCTQ6Y288 498 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TUBA1AQ71U36 451 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 FAM122BQ7Z309 247 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 NPEPL1Q8NDH3 523 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MFSD8Q8NHS3 518 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SLC25A43Q8WUT9 341 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SPRYD4Q8WW59 207 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 GATAD2BQ8WXI9 593 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SMPDL3BQ92485 455 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZBTB8AQ96BR9 441 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TSPAN32Q96QS1 320 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 NPAS1Q99742 590 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ADGRL4Q9HBW9 690 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 NDUFB11Q9NX14 153 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MRPL39Q9NYK5 338 aaKnown RBP13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ERRFI1Q9UJM3 462 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MYO7BQ6PIF6 2116 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 PTPN13Q12923 2485 aa13.01□□□□□ -0.33
TNFRSF1A-204ENST00000440083 USP9YO00507 2555 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 A0A1W2PRG6 482 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 LRRTM2O43300 516 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CLPXO76031 633 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SPI1P17947 270 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 AHCYP23526 432 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CA7P43166 264 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SELENBP1Q13228 472 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR7A5Q15622 319 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 LIPKQ5VXJ0 399 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZNF322Q6U7Q0 402 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 GDPGP1Q6ZNW5 385 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 FJX1Q86VR8 437 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 DOLPP1Q86YN1 238 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 PHC2Q8IXK0 858 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 RPRMLQ8N4K4 120 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SCAIQ8N9R8 606 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR6K6Q8NGW6 343 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZNF417Q8TAU3 575 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 FAM57AQ8TBR7 257 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZMYND19Q96E35 227 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SFXN2Q96NB2 322 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZNF587Q96SQ5 575 aaPredicted RBP13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 POTEKPQ9BYX7 375 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ALKBH4Q9NXW9 302 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MOKQ9UQ07 419 aa13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 UTP20O75691 2785 aaKnown RBP13□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR6C68A6NDL8 312 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 H3BML4 177 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 J3QRE1 110 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 GLCEO94923 617 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 IGHMP01871 453 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MT-ND5P03915 603 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 FKBP2P26885 142 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ACVR1BP36896 505 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 STARP49675 285 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 DIO1P49895 249 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 DSCR4P56555 118 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 RPS3AP61247 264 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 RPL27P61353 136 aaKnown RBP12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ACTA2P62736 377 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ACTG2P63267 376 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 GALEQ14376 348 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 C4orf17Q53FE4 359 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 RAET1LQ5VY80 246 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 SLC35F2Q8IXU6 374 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 OR2T4Q8NH00 348 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TBC1D15Q8TC07 691 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 DYNC2LI1Q8TCX1 351 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 NMNAT2Q9BZQ4 307 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 CHST11Q9NPF2 352 aa12.99□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TRIM36Q9NQ86 728 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms