RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 SLC25A28Q96A46 364 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ZC3H10Q96K80 434 aaKnown RBP8.26□□□□□ -1.09
COPB1-202ENST00000439561 CNTNAP3BQ96NU0 1288 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 GAL3ST4Q96RP7 486 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 MYADMQ96S97 322 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 DMRTA2Q96SC8 542 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 SLC22A11Q9NSA0 550 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 MTFP1Q9UDX5 166 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 KCNE5Q9UJ90 142 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 CES1P1Q9UKY3 287 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 SLC22A13Q9Y226 551 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 INSL6Q9Y581 213 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 RNF215Q9Y6U7 377 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 SEC16AO15027 2179 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 OR2M5A3KFT3 312 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 RFPL4AA6NLU0 287 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 RFPL4AL1F8VTS6 287 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 DNASE2O00115 360 aaPredicted RBP8.26□□□□□ -1.09
COPB1-202ENST00000439561 SPINT1O43278 529 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 TXNL1O43396 289 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 SLC25A12O75746 678 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ITGB8P26012 769 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 KCNJ3P48549 501 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ATP1B3P54709 279 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 TAS2R19P59542 299 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 PPP2CBP62714 309 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 PPP2CAP67775 309 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 HTRA4P83105 476 aaPredicted RBP8.26□□□□□ -1.09
COPB1-202ENST00000439561 C2orf76Q3KRA6 126 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 GLYATL3Q5SZD4 288 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 STPG1Q5TH74 334 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 CNKSR3Q6P9H4 555 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 PM20D2Q8IYS1 436 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 OR5T2Q8NGG2 359 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 OR1J4Q8NGS1 313 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 OR14A16Q8NHC5 309 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 HAVCR2Q8TDQ0 301 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ARL11Q969Q4 196 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ELOVL3Q9HB03 270 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 Q9N2J8 555 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 ATXN7L1Q9ULK2 861 aaPredicted RBP8.26□□□□□ -1.09
COPB1-202ENST00000439561 DAPP1Q9UN19 280 aa8.26□□□□□ -1.09
COPB1-202ENST00000439561 PRSS44E7EML9 344 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 M0R036 132 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 ZNF208O43345 1280 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 XRCC3O43542 346 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 SRPX2O60687 465 aaPredicted RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 NGFRP08138 427 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 CBX5P45973 191 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 RPS11P62280 158 aaKnown RBP eCLIP8.25□□□□□ -1.09
COPB1-202ENST00000439561 ZNF77Q15935 545 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 FAM76BQ5HYJ3 339 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 KRBOX4Q5JUW0 171 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 ZNF585AQ6P3V2 769 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 FIGLAQ6QHK4 219 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 SPACA7Q96KW9 195 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 SERINC2Q96SA4 455 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 PBX4Q9BYU1 374 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 METTL8Q9H825 291 aaKnown RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 C19orf53Q9UNZ5 99 aaPredicted RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 ZNF337Q9Y3M9 751 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 ETV7Q9Y603 341 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 GLCEO94923 617 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 OR2A4O95047 310 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 HPP00738 406 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 CT62P0C5K7 136 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 ADRA2CP18825 462 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 CEBPGP53567 150 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 SNRPNP63162 240 aaKnown RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 GFOD2Q3B7J2 385 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 ADAMTSL4Q6UY14 1074 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 SLC16A13Q7RTY0 426 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 PUSL1Q8N0Z8 303 aaKnown RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 OR6N1Q8NGY5 312 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 OR2A7Q96R45 310 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 PARP12Q9H0J9 701 aaKnown RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 PIGMQ9H3S5 423 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 ZNF629Q9UEG4 869 aaPredicted RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 MRPS2Q9Y399 296 aaKnown RBP8.25□□□□□ -1.09
COPB1-202ENST00000439561 FAM96BQ9Y3D0 163 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 TRAV20A0A0B4J274 112 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 A0A0B4J2E0 115 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 A0A1B0GX12 115 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 P2RX6O15547 441 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 AQP8O94778 261 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 PMS2P2O95744 297 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 GPR75O95800 540 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 RORAP35398 523 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 FBXW4P57775 412 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 TDGQ13569 410 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 MEP1BQ16820 701 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 LHX8Q68G74 356 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 VN1R4Q7Z5H5 301 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 PRSS58Q8IYP2 241 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 ZNF101Q8IZC7 436 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 OR2L13Q8N349 312 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 OR6K3Q8NGY3 331 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 CCL4L1Q8NHW4 92 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 METTL21AQ8WXB1 218 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms