RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 CDKN2AP42771 156 aaKnown RBP12.17□□□□□ -0.46
ACTN1-204ENST00000438964 MOGAT2Q3SYC2 334 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 METRNLQ641Q3 311 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 ARHGAP11AQ6P4F7 1023 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 RD3Q7Z3Z2 195 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 NRROSQ86YC3 692 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 GABRG1Q8N1C3 465 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 ZNF619Q8N2I2 560 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 OR1M1Q8NGA1 313 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 OR4A4PQ8NGN8 299 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 OR6N2Q8NGY6 317 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 ALG12Q9BV10 488 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 CHRNA9Q9UGM1 479 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 MRM2Q9UI43 246 aaKnown RBP12.17□□□□□ -0.46
ACTN1-204ENST00000438964 OBSL1O75147 1896 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 TMEM235A6NFC5 223 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 DUXAA6NLW8 204 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 RAB40ALP0C0E4 278 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 PEBP1P30086 187 aaKnown RBP12.17□□□□□ -0.46
ACTN1-204ENST00000438964 PBX2P40425 430 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 CASRP41180 1078 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 DUSP8Q13202 625 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 C2orf76Q3KRA6 126 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 Q499Y3 187 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 AVPI1Q5T686 147 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 ATPAF1Q5TC12 328 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-204ENST00000438964 KIRREL2Q6UWL6 708 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 UNQ9370/PRO34162Q6UXP9 181 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 GVQW1Q8N7I0 195 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 FAM174AQ8TBP5 190 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 RAB40AQ8WXH6 277 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 ADAM29Q9UKF5 820 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 RPH3AQ9Y2J0 694 aaPredicted RBP12.17□□□□□ -0.46
ACTN1-204ENST00000438964 FANCMQ8IYD8 2048 aa12.17□□□□□ -0.46
ACTN1-204ENST00000438964 C5orf51A6NDU8 294 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 BCL2L11O43521 198 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 XRCC3O43542 346 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 CCR4P51679 360 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 CDK3Q00526 305 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 ELAVL1Q15717 326 aaKnown RBP12.16□□□□□ -0.46
ACTN1-204ENST00000438964 ARHGAP11BQ3KRB8 267 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 FAM109BQ6ICB4 259 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-204ENST00000438964 C11orf87Q6NUJ2 197 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 NPEPL1Q8NDH3 523 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 FAM46BQ96A09 425 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 LRRC3BQ96PB8 259 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 GAREM1Q9H706 876 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 TNFSF18Q9UNG2 199 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 KIF26BQ2KJY2 2108 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 MNDAP41218 407 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DIO1P49895 249 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 RAB28P51157 221 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 RUNX2Q13950 521 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 CLINT1Q14677 625 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 CCDC157Q569K6 752 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DMRTC1Q5HYR2 192 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DGAT2L6Q6ZPD8 337 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 ZNF227Q86WZ6 799 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 ETFBKMTQ8IXQ9 262 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 ACBD4Q8NC06 268 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 OR2L3Q8NG85 312 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 CXorf40AQ8TE69 158 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 C14orf79Q96F83 325 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 CHRDQ9H2X0 955 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 EPHX3Q9H6B9 360 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 RXFP3Q9NSD7 469 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 MIOXQ9UGB7 285 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 TMED7Q9Y3B3 224 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 C17orf113A0A1B0GUU1 675 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 A0A1B0GW55 424 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 P2RX6O15547 441 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DUX4L2P0CJ85 424 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DUX4L3P0CJ86 424 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DUX4L4P0CJ87 422 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DUX4L5P0CJ88 424 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DUX4L6P0CJ89 424 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DUX4L7P0CJ90 424 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 EIPR1Q53HC9 387 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 CRIPAKQ8N1N5 446 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 SYS1Q8N2H4 156 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 KCNRGQ8N5I3 272 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 SLC6A7Q99884 636 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 PIGMQ9H3S5 423 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 DUX4Q9UBX2 424 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 GPN3Q9UHW5 284 aaPredicted RBP12.16□□□□□ -0.46
ACTN1-204ENST00000438964 CHD9Q3L8U1 2897 aa12.16□□□□□ -0.46
ACTN1-204ENST00000438964 FREM3P0C091 2139 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 HRKO00198 91 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 FGF17O60258 216 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 LY86O95711 162 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 CSF1P09603 554 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 PI3P19957 117 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 PRKXP51817 358 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 PPP1R1AQ13522 171 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 GFOD2Q3B7J2 385 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 C9orf152Q5JTZ5 239 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 MDGA2Q7Z553 956 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 BPIFB2Q8N4F0 458 aa12.15□□□□□ -0.46
ACTN1-204ENST00000438964 NAA11Q9BSU3 229 aaPredicted RBP12.15□□□□□ -0.46
ACTN1-204ENST00000438964 CST11Q9H112 138 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms