RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 LRRC63Q05C16 580 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CD47Q08722 323 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 MESDQ14696 234 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 MEF2DQ14814 521 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ALX1Q15699 326 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 KLHL40Q2TBA0 621 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 HFEQ30201 348 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 IFI44LQ53G44 452 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 SDHAF4Q5VUM1 108 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 FAM219BQ5XKK7 198 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 KCTD11Q693B1 232 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 B3GLCTQ6Y288 498 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 SCARA5Q6ZMJ2 495 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 KCTD9Q7L273 389 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF410Q86VK4 478 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 TMEM126BQ8IUX1 230 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 KDM8Q8N371 416 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 TEX29Q8N6K0 151 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ICA1LQ8NDH6 482 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCDC110Q8TBZ0 833 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 KCTD4Q8WVF5 259 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CRYGNQ8WXF5 182 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 LRRC58Q96CX6 371 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 TIMD4Q96H15 378 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CPB2Q96IY4 423 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 BMFQ96LC9 184 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 PANX3Q96QZ0 392 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 S1PR3Q99500 378 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CACNG6Q9BXT2 260 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 NLNQ9BYT8 704 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 NMUR2Q9GZQ4 415 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 PNPLA3Q9NST1 481 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC35D1Q9NTN3 355 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ACOXLQ9NUZ1 547 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 NMRK1Q9NWW6 199 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF226Q9NYT6 803 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 TAS2R16Q9NYV7 291 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 AIPL1Q9NZN9 384 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 RAB26Q9ULW5 256 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 NEU3Q9UQ49 428 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 TRAF3IP3Q9Y228 551 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 FOXA2Q9Y261 457 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 CAB39Q9Y376 341 aaPredicted RBP1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 TMED7Q9Y3B3 224 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 U3KQV3 271 aa1.68□□□□□ -2.14
HMGB1P18-201ENST00000438801 LPAP08519 4548 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 A0A1B0GWJ7 208 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 L7N2F9 121 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CHEK1O14757 476 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 RIPK2O43353 540 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CA11O75493 328 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 ADCY5O95622 1261 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 MBD3O95983 291 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 IFNA14P01570 189 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 APRTP07741 180 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SOD3P08294 240 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 ABHD2P08910 425 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 GZMAP12544 262 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 ZNF24P17028 368 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CYP3A5P20815 502 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CNTFRP26992 372 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 PSMA5P28066 241 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 MDH1P40925 334 aaKnown RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 MTIF2P46199 727 aaKnown RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CD151P48509 253 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 ACTR1AP61163 376 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC7A9P82251 487 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 TNFRSF17Q02223 184 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 NCBP1Q09161 790 aaKnown RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 EGFEM1PQ0D2K5 195 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CHIT1Q13231 466 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 DPYSQ14117 519 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCDC40Q4G0X9 1142 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 AARDQ4LEZ3 155 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 BOLA3Q53S33 107 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SPATA46Q5T0L3 261 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 CCDC183Q5T5S1 534 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 AGBL2Q5U5Z8 902 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC22A10Q63ZE4 541 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 ADNP2Q6IQ32 1131 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 KRTAP5-10Q6L8G5 202 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SLC25A24Q6NUK1 477 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 RGS9BPQ6ZS82 235 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 ABHD13Q7L211 337 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 PRSS42Q7Z5A4 293 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 LAX1Q8IWV1 398 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 AQP12AQ8IXF9 295 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 THEM5Q8N1Q8 247 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SIDT2Q8NBJ9 832 aaKnown RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 DEFB104AQ8WTQ1 72 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 TMEM186Q96B77 213 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 TUBGCP3Q96CW5 907 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 STARD4Q96DR4 205 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 C5orf30Q96GV9 206 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 RAB40CQ96S21 281 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 SSX3Q99909 188 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 C19orf43Q9BQ61 176 aa1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 RIOK1Q9BRS2 568 aaKnown RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 LLPHQ9BRT6 129 aaKnown RBP1.67□□□□□ -2.14
HMGB1P18-201ENST00000438801 ACPTQ9BZG2 426 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms