RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 CMTM3Q96MX0 182 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 VRK1Q99986 396 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 WDR77Q9BQA1 342 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ADGRL4Q9HBW9 690 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 CUTCQ9NTM9 273 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 FBXL4Q9UKA2 621 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 POMT2Q9UKY4 750 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 EMC9Q9Y3B6 208 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 A0A1W2PS29 197 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 TUBAL3A6NHL2 446 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF850A8MQ14 1090 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 NPIPA2E9PIF3 369 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 NPIPA3F8WFD2 350 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 FADS1O60427 444 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 BDKRB2P30411 391 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 RPS27P42677 84 aaKnown RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF84P51523 738 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 P2RX1P51575 399 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 LUMP51884 338 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 POLR2HP52434 150 aaKnown RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 PPP2CBP62714 309 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 PPP2CAP67775 309 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 HTRA3P83110 453 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ZP2Q05996 745 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 DBPQ10586 325 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 GSG1Q2KHT4 349 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM91Q6ZNR0 172 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ADGRE4PQ86SQ3 457 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 RASGRP3Q8IV61 690 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 IQCF2Q8IXL9 164 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF565Q8N9K5 539 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 OR2AK2Q8NG84 335 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 OR13H1Q8NG92 308 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 OR51T1Q8NGJ9 327 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 RSC1A1Q92681 617 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 SLC6A18Q96N87 628 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ST6GALNAC5Q9BVH7 336 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 DLL4Q9NR61 685 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 HIF3AQ9Y2N7 669 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 TMED7-TICAM2A0A0A6YYA0 188 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 NKX2-2O95096 273 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 LPLP06858 475 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ST6GAL1P15907 406 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 UBE2MP61081 183 aaKnown RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 IL10RAQ13651 578 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 GNMTQ14749 295 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 SLC22A6Q4U2R8 563 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 EMC4Q5J8M3 183 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 FAM69BQ5VUD6 431 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 TCEAL6Q6IPX3 200 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 LPCAT3Q6P1A2 487 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 VN1R4Q7Z5H5 301 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ETFBKMTQ8IXQ9 262 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 BCORP1Q8N888 145 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 FAM71CQ8NEG0 241 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 OR2G2Q8NGZ5 317 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 C16orf52Q8NHV5 167 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 AIFM2Q9BRQ8 373 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 SELENOIQ9C0D9 397 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 EIF5A2Q9GZV4 153 aaKnown RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF304Q9HCX3 659 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 CGGBP1Q9UFW8 167 aaPredicted RBP6.11□□□□□ -1.43
CSDE1-205ENST00000438362 SERGEFQ9UGK8 458 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 TMED7Q9Y3B3 224 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 RNF215Q9Y6U7 377 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 LOC285556D6RIA3 1793 aa6.11□□□□□ -1.43
CSDE1-205ENST00000438362 A0A1W2PPV9 198 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 FITM1A5D6W6 292 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 DOK2O60496 412 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 LILRB5O75023 590 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RBMXL2O75526 392 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 KLK3P07288 261 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 TMEM225BP0DP42 221 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ZNF14P17017 642 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 DRD3P35462 400 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 TPMTP51580 245 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RPL18Q07020 188 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 DOC2BQ14184 412 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 PRSS53Q2L4Q9 553 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 DEFB133Q30KQ1 61 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 EEF1A1P5Q5VTE0 462 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 DMKNQ6E0U4 476 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 C5orf46Q6UWT4 87 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SHISA6Q6ZSJ9 500 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 MCEMP1Q8IX19 187 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 FAM160A2Q8N612 972 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 TP53I13Q8NBR0 393 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SLC22A8Q8TCC7 542 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 NPRL2Q8WTW4 380 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ST8SIA4Q92187 359 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 OR1F2PQ96R84 312 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 POFUT1Q9H488 388 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 SCPEP1Q9HB40 452 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 RYDENQ9NUL5 291 aaKnown RBP6.1□□□□□ -1.43
CSDE1-205ENST00000438362 FBXO34Q9NWN3 711 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 KIF25Q9UIL4 384 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 GGT3PA6NGU5 568 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 A8MVM7 634 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 AGPAT2O15120 278 aa6.1□□□□□ -1.43
CSDE1-205ENST00000438362 ARPC3O15145 178 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms