RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OR4K17Q8NGC6 315 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 ASB10Q8WXI3 467 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 ASB17Q8WXJ9 295 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 OR14A2Q96R54 314 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 IRF2BPLQ9H1B7 796 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 RASD1Q9Y272 281 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 A0A1W2PQ09 198 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 ANKRD61A6NGH8 418 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 NOTOA8MTQ0 251 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 NPIPA5E9PKD4 350 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 PSMD9O00233 223 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 EFNA2O43921 213 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 CSF3P09919 207 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 CLDN6P56747 220 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 HSD17B12Q53GQ0 312 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 CCBE1Q6UXH8 406 aaPredicted RBP23.09■■□□□ 1.29
CPNE1-216ENST00000437340 MAP6Q96JE9 813 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.09■■□□□ 1.295e-12■■■■□ 21.5
CPNE1-216ENST00000437340 NPIPA1Q9UND3 350 aa23.09■■□□□ 1.29
CPNE1-216ENST00000437340 A0A1W2PNV4 684 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 PCNX2A6NKB5 2137 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 ZFPL1O95159 310 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 HLA-DOBP13765 273 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 CTLA4P16410 223 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 RANBP1P43487 201 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 SSR4P51571 173 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 OR10A3P58181 314 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 MELKQ14680 651 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 STPG1Q5TH74 334 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 DNM1P34Q6PK57 102 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 IL20RBQ6UXL0 311 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 PIP4P1Q86T03 277 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 SLC25A43Q8WUT9 341 aaPredicted RBP23.08■■□□□ 1.29
CPNE1-216ENST00000437340 THEM6Q8WUY1 208 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 FBXL2Q9UKC9 423 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 IKZF2Q9UKS7 526 aa23.08■■□□□ 1.29
CPNE1-216ENST00000437340 H3BML4 177 aa23.07■■□□□ 1.28
CPNE1-216ENST00000437340 HLA-DQA2P01906 255 aa23.07■■□□□ 1.28
CPNE1-216ENST00000437340 RAB40ALP0C0E4 278 aa23.07■■□□□ 1.28
CPNE1-216ENST00000437340 HSF1Q00613 529 aa23.07■■□□□ 1.28
CPNE1-216ENST00000437340 ASAH1Q13510 395 aa23.07■■□□□ 1.28
CPNE1-216ENST00000437340 C6orf15Q6UXA7 325 aaPredicted RBP23.07■■□□□ 1.28
CPNE1-216ENST00000437340 ZBTB8AQ96BR9 441 aa23.07■■□□□ 1.28
CPNE1-216ENST00000437340 TAAR9Q96RI9 348 aa23.07■■□□□ 1.28
CPNE1-216ENST00000437340 CYSLTR2Q9NS75 346 aa23.07■■□□□ 1.28
CPNE1-216ENST00000437340 A0A087WZY1 265 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 FAM25AB3EWG3 89 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 FAM25CB3EWG5 89 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 FAM25GB3EWG6 89 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 SHISA8B8ZZ34 492 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 ZNF593O00488 134 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-216ENST00000437340 TMEM127O75204 238 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 RPP14O95059 124 aaKnown RBP23.06■■□□□ 1.28
CPNE1-216ENST00000437340 IFNGR1P15260 489 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 SPNP16150 400 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 ELK1P19419 428 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 APEX1P27695 318 aaKnown RBP23.06■■□□□ 1.28
CPNE1-216ENST00000437340 GLO1Q04760 184 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 SLC35D2Q76EJ3 337 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 RAB11FIP2Q7L804 512 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 RPS19BP1Q86WX3 136 aaKnown RBP23.06■■□□□ 1.28
CPNE1-216ENST00000437340 C5orf34Q96MH7 638 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 DDA1Q9BW61 102 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 ANGPTL4Q9BY76 406 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 TSPAN10Q9H1Z9 355 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-216ENST00000437340 MRPL22Q9NWU5 206 aaKnown RBP23.06■■□□□ 1.28
CPNE1-216ENST00000437340 ABRACLQ9P1F3 81 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 ZNF432O94892 652 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 GPANK1O95872 356 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 HLA-DQB1P01920 261 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 MYBPHQ13203 477 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 SELENBP1Q13228 472 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 IL18Q14116 193 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 INPP5JQ15735 1006 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-216ENST00000437340 CEP78Q5JTW2 689 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 SLC18B1Q6NT16 456 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 PLCZ1Q86YW0 608 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 KDM8Q8N371 416 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 OR5AK2Q8NH90 309 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 NTNG2Q96CW9 530 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 OR8B4Q96RC9 309 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 KCNK17Q96T54 332 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 CDCP1Q9H5V8 836 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 ZNF160Q9HCG1 818 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 FRRS1LQ9P0K9 344 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 KCNG2Q9UJ96 466 aa23.06■■□□□ 1.28
CPNE1-216ENST00000437340 RPH3AQ9Y2J0 694 aaPredicted RBP23.06■■□□□ 1.28
CPNE1-216ENST00000437340 PDCD5O14737 125 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 ICAM2P13598 275 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 SRMP19623 302 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 MAPK3P27361 379 aaPredicted RBP23.05■■□□□ 1.28
CPNE1-216ENST00000437340 TALDO1P37837 337 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 MLF1P58340 268 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 SLC25A35Q3KQZ1 300 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 PRAMEF20Q5VT98 475 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 FDX2Q6P4F2 183 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 Q8N402 240 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 ZNF454Q8N9F8 522 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 PAQR8Q8TEZ7 354 aa23.05■■□□□ 1.28
CPNE1-216ENST00000437340 RGP1Q92546 391 aaPredicted RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms