RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SPATA46Q5T0L3 261 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 TMEM53Q6P2H8 277 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 PIWIL3Q7Z3Z3 882 aaKnown RBP12.55□□□□□ -0.4
HDAC8-213ENST00000436675 POP5Q969H6 163 aaKnown RBP12.55□□□□□ -0.4
HDAC8-213ENST00000436675 SLC25A28Q96A46 364 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 VPS33AQ96AX1 596 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 DCLRE1CQ96SD1 692 aaKnown RBP12.55□□□□□ -0.4
HDAC8-213ENST00000436675 GPA33Q99795 319 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 MEAF6Q9HAF1 191 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 C12orf10Q9HB07 376 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 LGALS13Q9UHV8 139 aa12.55□□□□□ -0.4
HDAC8-213ENST00000436675 PLPP3O14495 311 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 TYROBPO43914 113 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 FOXH1O75593 365 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 GPANK1O95872 356 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 IGHV1-46P01743 117 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 MT-ND5P03915 603 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 RNASE1P07998 156 aaKnown RBP12.54□□□□□ -0.4
HDAC8-213ENST00000436675 CCNOP22674 350 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 IFFO1Q0D2I5 559 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 LRRC74AQ0VAA2 488 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 SLC9A3R2Q15599 337 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 TBC1D28Q2M2D7 210 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 SPRNQ5BIV9 151 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 OR4K5Q8NGD3 323 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 OR1J1Q8NGS3 322 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 DNAJA4Q8WW22 397 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-213ENST00000436675 TMEM54Q969K7 222 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 ZMAT3Q9HA38 289 aaKnown RBP12.54□□□□□ -0.4
HDAC8-213ENST00000436675 TMEM38BQ9NVV0 291 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 DCAF16Q9NXF7 216 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 PLEK2Q9NYT0 353 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 GLTPQ9NZD2 209 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 SELENONQ9NZV5 590 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 PURGQ9UJV8 347 aaKnown RBP12.54□□□□□ -0.4
HDAC8-213ENST00000436675 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.54□□□□□ -0.4
HDAC8-213ENST00000436675 GPR45Q9Y5Y3 372 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 AUP1Q9Y679 476 aa12.54□□□□□ -0.4
HDAC8-213ENST00000436675 C5orf58C9J3I9 102 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 TRAPPC2LH3BP13 241 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 SDHDO14521 159 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 TPST1O60507 370 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 SBK2P0C263 348 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 ADORA3P0DMS8 318 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 BGNP21810 368 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 ZNF154Q13106 437 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 MELKQ14680 651 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 MOGQ16653 247 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 TUSC1Q2TAM9 212 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 OGFOD2Q6N063 350 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 ULK3Q6PHR2 472 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 LRFN4Q6PJG9 635 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 PXKQ7Z7A4 578 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 LSMEM1Q8N8F7 131 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 SCAIQ8N9R8 606 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 GEMIN6Q8WXD5 167 aaKnown RBP12.53□□□□□ -0.4
HDAC8-213ENST00000436675 SLC47A1Q96FL8 570 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 EPYCQ99645 322 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 BCL2L14Q9BZR8 327 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 MS4A7Q9GZW8 240 aaPredicted RBP12.53□□□□□ -0.4
HDAC8-213ENST00000436675 SLITRK2Q9H156 845 aa12.53□□□□□ -0.4
HDAC8-213ENST00000436675 WDR55Q9H6Y2 383 aaPredicted RBP12.53□□□□□ -0.4
HDAC8-213ENST00000436675 MRPL39Q9NYK5 338 aaKnown RBP12.53□□□□□ -0.4
HDAC8-213ENST00000436675 IQCMA0A1B0GVH7 501 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 DHHO43323 396 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 UBOX5O94941 541 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 OR6A2O95222 327 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 FARS2O95363 451 aaKnown RBP12.52□□□□□ -0.41
HDAC8-213ENST00000436675 IGHV3-13P01766 116 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 EPHA3P29320 983 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 MPV17P39210 176 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 NCALDP61601 193 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
HDAC8-213ENST00000436675 PDCD4Q53EL6 469 aaKnown RBP12.52□□□□□ -0.41
HDAC8-213ENST00000436675 TMEM255AQ5JRV8 349 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 C6orf10Q5SRN2 563 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 THEM4Q5T1C6 240 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 SLC35D2Q76EJ3 337 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 SPATC1Q76KD6 591 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 SLC16A14Q7RTX9 510 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 LRRC18Q8N456 261 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 RBM15BQ8NDT2 890 aaKnown RBP12.52□□□□□ -0.41
HDAC8-213ENST00000436675 OR1J2Q8NGS2 313 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 NFKBIDQ8NI38 313 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 BBS10Q8TAM1 723 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 SLC35B4Q969S0 331 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 TMIGD2Q96BF3 282 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 TRIM44Q96DX7 344 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-213ENST00000436675 LRMDAQ9H2I8 198 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 BCL2L10Q9HD36 194 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 NPHS2Q9NP85 383 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 TCF7L2Q9NQB0 619 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 PDP1Q9P0J1 537 aaPredicted RBP12.52□□□□□ -0.41
HDAC8-213ENST00000436675 EGFL7Q9UHF1 273 aa12.52□□□□□ -0.41
HDAC8-213ENST00000436675 NBEAL2Q6ZNJ1 2754 aa12.51□□□□□ -0.41
HDAC8-213ENST00000436675 DOCK11Q5JSL3 2073 aa12.51□□□□□ -0.41
HDAC8-213ENST00000436675 MDFIC2A0A1B0GVS7 189 aa12.51□□□□□ -0.41
HDAC8-213ENST00000436675 PLSCR5A0PG75 271 aa12.51□□□□□ -0.41
HDAC8-213ENST00000436675 ZSCAN5BA6NJL1 495 aa12.51□□□□□ -0.41
HDAC8-213ENST00000436675 SLC22A3O75751 556 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms