RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 GPN1Q9HCN4 374 aaPredicted RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 SLC17A5Q9NRA2 495 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 B3GNT2Q9NY97 397 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 TAS2R8Q9NYW2 309 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 SRPK3Q9UPE1 567 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 NPTNQ9Y639 398 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 MKI67P46013 3256 aaKnown RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 COL5A1P20908 1838 aaPredicted RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 TDRD6O60522 2096 aaKnown RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 C11orf98E9PRG8 122 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 XRCC3O43542 346 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 GLSO94925 669 aaPredicted RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 IL5P05113 134 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 TPOP07202 933 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 SYPP08247 313 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 ADRB1P08588 477 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 GLB1P16278 677 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 ADRA2CP18825 462 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 C4BPBP20851 252 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 CDK2P24941 298 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 ABCD3P28288 659 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 KIR3DL2P43630 455 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 SUMO3P55854 103 aaPredicted RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 SLC26A5P58743 744 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 SNRPD2P62316 118 aaKnown RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 ROM1Q03395 351 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 C19orf57Q0VDD7 668 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 ZP4Q12836 540 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 UBXN2BQ14CS0 331 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 TOMM20Q15388 145 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 TOMM34Q15785 309 aaPredicted RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 ACKR1Q16570 336 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 SFRP4Q6FHJ7 346 aaPredicted RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 DNM1P34Q6PK57 102 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 KRT77Q7Z794 578 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 GLB1L2Q8IW92 636 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 TDHQ8IZJ6 230 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 FAM109AQ8N4B1 249 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 ZNF248Q8NDW4 579 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 TSEN15Q8WW01 171 aaKnown RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 MCHR2Q969V1 340 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 ZNF524Q96C55 264 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 ELF4Q99607 663 aaPredicted RBP9.42□□□□□ -0.9
CD44-210ENST00000434472 RTN4RQ9BZR6 473 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 NRSN2Q9GZP1 204 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 VN1R1Q9GZP7 353 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 ZFP64Q9NPA5 681 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 MKL2Q9ULH7 1088 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 CA14Q9ULX7 337 aa9.42□□□□□ -0.9
CD44-210ENST00000434472 LAMA2P24043 3122 aaKnown RBP9.41□□□□□ -0.9
CD44-210ENST00000434472 THADAQ6YHU6 1953 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 IGLV1-36A0A0B4J1U3 117 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 SNRPGP15A8MWD9 76 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 PLPP3O14495 311 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 SDC3O75056 442 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 RBBP9O75884 186 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 MAS1P04201 325 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 CSF1P09603 554 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 ATXN8OSP0DMR3 200 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 FOLR1P15328 257 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 DNASE1P24855 282 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 MAGEB1P43366 347 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 MECP2P51608 486 aaKnown RBP9.41□□□□□ -0.9
CD44-210ENST00000434472 RIDAP52758 137 aaKnown RBP9.41□□□□□ -0.9
CD44-210ENST00000434472 CLDN12P56749 244 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 SSBP1Q04837 148 aaKnown RBP9.41□□□□□ -0.9
CD44-210ENST00000434472 DMWDQ09019 674 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 RAB11BQ15907 218 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 VWA2Q5GFL6 755 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 WDR38Q5JTN6 314 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 TEX30Q5JUR7 227 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 ANKRD16Q6P6B7 361 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 POMZP3Q6PJE2 187 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 WDR74Q6RFH5 385 aaPredicted RBP9.41□□□□□ -0.9
CD44-210ENST00000434472 ADGRG3Q86Y34 549 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 SERPINA12Q8IW75 414 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 PRSS35Q8N3Z0 413 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 SPICQ8N5J4 248 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 OR11G2Q8NGC1 345 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 OR8H1Q8NGG4 311 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 ST8SIA1Q92185 356 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 TMEM106AQ96A25 262 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 NXPE2Q96DL1 559 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 ZNF436Q9C0F3 470 aaPredicted RBP9.41□□□□□ -0.9
CD44-210ENST00000434472 TGIF2Q9GZN2 237 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 NOX3Q9HBY0 568 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 DLL4Q9NR61 685 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 NKIRAS2Q9NYR9 191 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 KCNG2Q9UJ96 466 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 HEATR5AQ86XA9 2040 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 MYO9BQ13459 2157 aa9.41□□□□□ -0.9
CD44-210ENST00000434472 SLC22A23A1A5C7 686 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 CDC14CA4D256 554 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 ANKUB1A6NFN9 424 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 TOX3O15405 576 aaPredicted RBP9.4□□□□□ -0.9
CD44-210ENST00000434472 GMDSO60547 372 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 SLC16A7O60669 478 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 CD2P06729 351 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 SPARCP09486 303 aa9.4□□□□□ -0.9
CD44-210ENST00000434472 CPN1P15169 458 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms