RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 GRK1Q15835 563 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 NKAIN2Q5VXU1 208 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 SDR16C5Q8N3Y7 309 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 SUN5Q8TC36 379 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 LMX1AQ8TE12 382 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 WDR89Q96FK6 387 aaPredicted RBP10.69□□□□□ -0.7
CD44-209ENST00000433892 LCORQ96JN0 433 aaPredicted RBP10.69□□□□□ -0.7
CD44-209ENST00000433892 SLC46A1Q96NT5 459 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 NKX3-1Q99801 234 aaPredicted RBP10.69□□□□□ -0.7
CD44-209ENST00000433892 PELOQ9BRX2 385 aaKnown RBP10.69□□□□□ -0.7
CD44-209ENST00000433892 ADAM19Q9H013 955 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 PDE7BQ9NP56 450 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 TAS2R5Q9NYW4 299 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 PIPOXQ9P0Z9 390 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 UBQLN2Q9UHD9 624 aa10.69□□□□□ -0.7
CD44-209ENST00000433892 PCDH15Q96QU1 1955 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 TRBV5-7A0A0A0MS05 114 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 RPS10-NUDT3A0A1W2PQS6 291 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 ZSCAN5BA6NJL1 495 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 TMEM212A6NML5 194 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 H0YIG0 161 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 M0R233 179 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 LDOC1O95751 146 aaPredicted RBP10.68□□□□□ -0.7
CD44-209ENST00000433892 HRGP04196 525 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 FCER2P06734 321 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 FBXO45P0C2W1 286 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 GALNSP34059 522 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 NUDT1P36639 197 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 KIR3DL2P43630 455 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 EGR3Q06889 387 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 PCGF3Q3KNV8 242 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 PRAMEF17Q5VTA0 474 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 MARCH3Q86UD3 253 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 ZNF227Q86WZ6 799 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 SIX5Q8N196 739 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 OR51D1Q8NGF3 324 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 OR52B4Q8NGK2 314 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 ZNF417Q8TAU3 575 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 SLC25A36Q96CQ1 311 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 RADILQ96JH8 1075 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 KCNK15Q9H427 330 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 STEAP1Q9UHE8 339 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 FBXL3Q9UKT7 428 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 GTF2A1LQ9UNN4 478 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 ARID1BQ8NFD5 2236 aaPredicted RBP10.68□□□□□ -0.7
CD44-209ENST00000433892 TMEM150CB9EJG8 249 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 PYCARD-AS1I3L0S3 204 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 XRCC3O43542 346 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 CREBL2O60519 120 aaPredicted RBP10.68□□□□□ -0.7
CD44-209ENST00000433892 NDUFB6O95139 128 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 IGLV3-19P01714 112 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 IFNGR1P15260 489 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 CSRP1P21291 193 aaKnown RBP10.68□□□□□ -0.7
CD44-209ENST00000433892 CCKBRP32239 447 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 LTBRP36941 435 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 PSMA6P60900 246 aaKnown RBP10.68□□□□□ -0.7
CD44-209ENST00000433892 ZP2Q05996 745 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 ELOCQ15369 112 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 MEP1BQ16820 701 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 WDR38Q5JTN6 314 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 YOD1Q5VVQ6 348 aaPredicted RBP10.68□□□□□ -0.7
CD44-209ENST00000433892 SIGIRRQ6IA17 410 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 CHRDL2Q6WN34 429 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 OTOSQ8NHW6 89 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 TSEN15Q8WW01 171 aaKnown RBP10.68□□□□□ -0.7
CD44-209ENST00000433892 PPP1R14AQ96A00 147 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 ADIPOR1Q96A54 375 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 C4orf45Q96LM5 186 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 DCBLD2Q96PD2 775 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 TPSD1Q9BZJ3 242 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 LAT2Q9GZY6 243 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 ELOVL3Q9HB03 270 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 DHCR7Q9UBM7 475 aaKnown RBP10.68□□□□□ -0.7
CD44-209ENST00000433892 AUP1Q9Y679 476 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 TMEM14AQ9Y6G1 99 aa10.68□□□□□ -0.7
CD44-209ENST00000433892 MEIS3P1A6NDR6 274 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 FRG2CA6NGY1 282 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 XKRYO14609 159 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 RBBP9O75884 186 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 ZNF432O94892 652 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 DDAH2O95865 285 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 PDGFAP04085 211 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 IGKV3-11P04433 115 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 ITGA5P08648 1049 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 CPN1P15169 458 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 IL12BP29460 328 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 MNDAP41218 407 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 AP2S1P53680 142 aaPredicted RBP10.67□□□□□ -0.7
CD44-209ENST00000433892 RP1P56715 2156 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 GUCA2AQ02747 115 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 RASGEF1BQ0VAM2 473 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 NHLRC1Q6VVB1 395 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 PRSS58Q8IYP2 241 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 SPICQ8N5J4 248 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 OR4D10Q8NGI6 311 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 C15orf40Q8WUR7 153 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 METTL21AQ8WXB1 218 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 MCHR2Q969V1 340 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.67□□□□□ -0.7
CD44-209ENST00000433892 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms