RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 ZBTB46Q86UZ6 589 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 NMD3Q96D46 503 aaKnown RBP23.46■■□□□ 1.35
TMEM248-205ENST00000433271 TEAD3Q99594 435 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 TP63Q9H3D4 680 aaPredicted RBP23.46■■□□□ 1.35
TMEM248-205ENST00000433271 WARS2Q9UGM6 360 aaKnown RBP23.46■■□□□ 1.35
TMEM248-205ENST00000433271 TPRKBQ9Y3C4 175 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 FAM215AQ9Y5M1 114 aa23.46■■□□□ 1.35
TMEM248-205ENST00000433271 MBD3L4A6NDZ8 208 aaPredicted RBP23.45■■□□□ 1.34
TMEM248-205ENST00000433271 MBD3L3A6NE82 208 aaPredicted RBP23.45■■□□□ 1.34
TMEM248-205ENST00000433271 MBD3L5A6NJ08 208 aaPredicted RBP23.45■■□□□ 1.34
TMEM248-205ENST00000433271 DCTN6O00399 190 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 FAM20BO75063 409 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 SS18L1O75177 396 aaPredicted RBP23.45■■□□□ 1.34
TMEM248-205ENST00000433271 SLC43A1O75387 559 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 DBTP11182 482 aaKnown RBP23.45■■□□□ 1.34
TMEM248-205ENST00000433271 SLC35D3Q5M8T2 416 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 DOLPP1Q86YN1 238 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 C20orf196Q8IYI0 205 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 C9orf106Q8NAJ2 232 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 ST6GALNAC3Q8NDV1 305 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 MBD3L2Q8NHZ7 208 aaPredicted RBP23.45■■□□□ 1.34
TMEM248-205ENST00000433271 TMEM54Q969K7 222 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 GLTPQ9NZD2 209 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 PSORS1C1Q9UIG5 152 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 FOXD3Q9UJU5 478 aaPredicted RBP23.45■■□□□ 1.34
TMEM248-205ENST00000433271 B9D1Q9UPM9 204 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 MOKQ9UQ07 419 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 ZGRF1Q86YA3 2104 aa23.45■■□□□ 1.34
TMEM248-205ENST00000433271 SLC16A7O60669 478 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 CTLA4P16410 223 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 AGTR1P30556 359 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 MTNR1AP48039 350 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 CSNK1A1P48729 337 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 RPS7P62081 194 aaKnown RBP23.44■■□□□ 1.34
TMEM248-205ENST00000433271 ZNF91Q05481 1191 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 KCTD21Q4G0X4 260 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 PROKR2Q8NFJ6 384 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 OR6N1Q8NGY5 312 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 CCDC182A6NF36 153 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 SLC15A1P46059 708 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 FMODQ06828 376 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 LRFN4Q6PJG9 635 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 DNM1P34Q6PK57 102 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 SEM1Q6ZVN7 128 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 OR51L1Q8NGJ5 315 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 ZNRF4Q8WWF5 429 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 KISS1RQ969F8 398 aaPredicted RBP23.44■■□□□ 1.34
TMEM248-205ENST00000433271 RERGLQ9H628 205 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 MRPS18AQ9NVS2 196 aaKnown RBP23.44■■□□□ 1.34
TMEM248-205ENST00000433271 HAO2Q9NYQ3 351 aa23.44■■□□□ 1.34
TMEM248-205ENST00000433271 MED12LQ86YW9 2145 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 PTGES3LE9PB15 166 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 GLCEO94923 617 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 LYNP07948 512 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 RPSAP08865 295 aaKnown RBP23.43■■□□□ 1.34
TMEM248-205ENST00000433271 PYCR1P32322 319 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 GUSBP1Q15486 140 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 B3GNT6Q6ZMB0 384 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 ZNF540Q8NDQ6 660 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 GGHQ92820 318 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 MCHR2Q969V1 340 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 RACGAP1Q9H0H5 632 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 DUSP21Q9H596 190 aa23.43■■□□□ 1.34
TMEM248-205ENST00000433271 IGLV1-36A0A0B4J1U3 117 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 EFCAB10A6NFE3 127 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 OR6C65A6NJZ3 312 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 LINC01590Q5TEZ4 76 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 B3GLCTQ6Y288 498 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 FAM214BQ7L5A3 538 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 IPCEF1Q8WWN9 437 aaPredicted RBP23.42■■□□□ 1.34
TMEM248-205ENST00000433271 RNFT2Q96EX2 444 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 RHNO1Q9BSD3 238 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 ZNF696Q9H7X3 374 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 FKBP14Q9NWM8 211 aa23.42■■□□□ 1.34
TMEM248-205ENST00000433271 CNOT2Q9NZN8 540 aaKnown RBP23.42■■□□□ 1.34
TMEM248-205ENST00000433271 KALRNO60229 2985 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 TRIM64A6NGJ6 449 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 FAM171A2A8MVW0 826 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 QDPRP09417 244 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 GSTT1P30711 240 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 TIMP3P35625 211 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 CENPAP49450 140 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 ZNF133P52736 654 aaPredicted RBP23.41■■□□□ 1.34
TMEM248-205ENST00000433271 GABARAPL2P60520 117 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 SLC35A2P78381 396 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 PHYHD1Q5SRE7 291 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 LCN1P1Q5VSP4 162 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 SLC25A47Q6Q0C1 308 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 NUFIP2Q7Z417 695 aaKnown RBP23.41■■□□□ 1.34
TMEM248-205ENST00000433271 GCNT2Q8N0V5 402 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 OR6K6Q8NGW6 343 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 TINAGQ9UJW2 476 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 SHANK1Q9Y566 2161 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 IGKV1D-43A0A0B4J1Z2 117 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 KHDRBS3O75525 346 aaKnown RBP23.41■■□□□ 1.34
TMEM248-205ENST00000433271 PIPP12273 146 aaPredicted RBP23.41■■□□□ 1.34
TMEM248-205ENST00000433271 BLVRAP53004 296 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 ETFDHQ16134 617 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 KLHL22Q53GT1 634 aa23.41■■□□□ 1.34
TMEM248-205ENST00000433271 RIPPLY2Q5TAB7 128 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms