RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 SEC61A2Q9H9S3 476 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 NTN4Q9HB63 628 aa12.79□□□□□ -0.36
SGCE-204ENST00000428696 CRYBG3Q68DQ2 2970 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 SAC3D1A6NKF1 404 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 DHHO43323 396 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 SLC2A10O95528 541 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 THBDP07204 575 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 CD79AP11912 226 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 B4GALT1P15291 398 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 GUCA1AP43080 201 aaPredicted RBP12.78□□□□□ -0.36
SGCE-204ENST00000428696 PCYT1AP49585 367 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 FMODQ06828 376 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 PIGFQ07326 219 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 KRR1Q13601 381 aaKnown RBP12.78□□□□□ -0.36
SGCE-204ENST00000428696 GK3PQ14409 553 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 SGCAQ16586 387 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 TIMM23BQ5SRD1 257 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 FAM205BPQ63HN1 556 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 GPR139Q6DWJ6 353 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 ZFP1Q6P2D0 407 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 ANKRD16Q6P6B7 361 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 SHQ1Q6PI26 577 aaKnown RBP12.78□□□□□ -0.36
SGCE-204ENST00000428696 ZNF813Q6ZN06 617 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 ZNF620Q6ZNG0 422 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 P2RY8Q86VZ1 359 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 JAZF1Q86VZ6 243 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 ZNF295-AS1Q8N0V1 137 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 OR5K1Q8NHB7 308 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 MAGEE2Q8TD90 523 aaPredicted RBP12.78□□□□□ -0.36
SGCE-204ENST00000428696 HTRA1Q92743 480 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 DUS3LQ96G46 650 aaKnown RBP12.78□□□□□ -0.36
SGCE-204ENST00000428696 PKP2Q99959 881 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 DGCR6LQ9BY27 220 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 NGBQ9NPG2 151 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 NRIP3Q9NQ35 241 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 CDH10Q9Y6N8 788 aa12.78□□□□□ -0.36
SGCE-204ENST00000428696 A6NNC1 897 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 ZNF99A8MXY4 864 aaPredicted RBP12.77□□□□□ -0.37
SGCE-204ENST00000428696 M0R1B8 84 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 PDLIM1O00151 329 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 ANXA8P13928 327 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 SDHAP31040 664 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 CDAP32320 146 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 SH3BGRP55822 239 aaPredicted RBP12.77□□□□□ -0.37
SGCE-204ENST00000428696 FXYD6P3P58550 94 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 COX10Q12887 443 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 TBRG1Q3YBR2 411 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 RASSF6Q6ZTQ3 369 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 HIPK1Q86Z02 1210 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 OR4K13Q8NH42 304 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 ZNF519Q8TB69 540 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 TEX47Q8TBZ9 253 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 BCL2L2Q92843 193 aaPredicted RBP12.77□□□□□ -0.37
SGCE-204ENST00000428696 OTULINQ96BN8 352 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 CENPNQ96H22 339 aaPredicted RBP12.77□□□□□ -0.37
SGCE-204ENST00000428696 MRPL13Q9BYD1 178 aaKnown RBP12.77□□□□□ -0.37
SGCE-204ENST00000428696 OR10A4Q9H209 315 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 SMURF2Q9HAU4 748 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 S100A14Q9HCY8 104 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 SLC17A5Q9NRA2 495 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 PKDREJQ9NTG1 2253 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 ALPK2Q86TB3 2170 aa12.77□□□□□ -0.37
SGCE-204ENST00000428696 A0A1W2PPL8 197 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 NPIPB13A6NJU9 1138 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 NPIPB4C9JG80 1138 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 RPL36A-HNRNPH2H7BZ11 118 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 SLC16A7O60669 478 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 WNT11O96014 354 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 IGHMP01871 453 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 PRF1P14222 555 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 SSTR2P30874 369 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 SLC36A3Q495N2 470 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 THEM4Q5T1C6 240 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 RPL13AP3Q6NVV1 102 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 LEG1Q6P5S2 330 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 KLHL17Q6TDP4 642 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.76□□□□□ -0.37
SGCE-204ENST00000428696 LRRC18Q8N456 261 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 WDR31Q8NA23 367 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 ACBD4Q8NC06 268 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 C1orf162Q8NEQ5 155 aaPredicted RBP12.76□□□□□ -0.37
SGCE-204ENST00000428696 OR52E2Q8NGJ4 325 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 NRBF2Q96F24 287 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 PLPPR2Q96GM1 343 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 FOXN4Q96NZ1 517 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 KCNK17Q96T54 332 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 FOXB1Q99853 325 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 SH3GL3Q99963 347 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 ALG12Q9BV10 488 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 PLA2G12AQ9BZM1 189 aa12.76□□□□□ -0.37
SGCE-204ENST00000428696 SRA1Q9HD15 236 aaKnown RBP12.76□□□□□ -0.37
SGCE-204ENST00000428696 ASH1LQ9NR48 2969 aaKnown RBP12.75□□□□□ -0.37
SGCE-204ENST00000428696 CELSR2Q9HCU4 2923 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 SLC22A23A1A5C7 686 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 PRSS37A4D1T9 235 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 H3BNX3 289 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 IMPA2O14732 288 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 FARS2O95363 451 aaKnown RBP12.75□□□□□ -0.37
SGCE-204ENST00000428696 RENP00797 406 aa12.75□□□□□ -0.37
SGCE-204ENST00000428696 HLA-HP01893 362 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms