RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 NAGAP17050 411 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 MSR1P21757 451 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 GPR6P46095 362 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-206ENST00000428680 CORO7P57737 925 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 ALKBH6Q3KRA9 238 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 ENTPD8Q5MY95 495 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 NPSR1Q6W5P4 371 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 PRSS42Q7Z5A4 293 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 ANKRD37Q7Z713 158 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 CCDC71Q8IV32 467 aaPredicted RBP6.59□□□□□ -1.35
CNOT4-206ENST00000428680 TMEM151AQ8N4L1 468 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 MS4A15Q8N5U1 240 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 SCGB1C1Q8TD33 95 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 TM4SF18Q96CE8 201 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 PRRC1Q96M27 445 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 C3orf30Q96M34 536 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 PLEKHA3Q9HB20 300 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 ERVK13-1Q9NX77 482 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 A3GALT2U3KPV4 340 aa6.59□□□□□ -1.35
CNOT4-206ENST00000428680 IGHV3-15A0A0B4J1V0 119 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 CRYM-AS1A6NIL9 109 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 H7C417 338 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 PRKNO60260 465 aaPredicted RBP6.59□□□□□ -1.36
CNOT4-206ENST00000428680 FBXO45P0C2W1 286 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 GLRA1P23415 457 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 WDR4P57081 412 aaKnown RBP6.59□□□□□ -1.36
CNOT4-206ENST00000428680 HBA1P69905 142 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 RIPPLY1Q0D2K3 151 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 CATR1Q13166 79 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 GNMTQ14749 295 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 TATDN3Q17R31 274 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 KANK2Q63ZY3 851 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 B3GNT8Q7Z7M8 397 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 GALNT11Q8NCW6 608 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 OR10G3Q8NGC4 313 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 OR4D6Q8NGJ1 314 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 HSD17B8Q92506 261 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 STACQ99469 402 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 NUDT9Q9BW91 350 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 METTL9Q9H1A3 318 aa6.59□□□□□ -1.36
CNOT4-206ENST00000428680 THADAQ6YHU6 1953 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 NOTCH3Q9UM47 2321 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 PLPP1O14494 284 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ICOSLGO75144 302 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ACTL6AO96019 429 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ETV5P41161 510 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 FXYD4P59646 89 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 FGL1Q08830 312 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 BLOC1S3Q6QNY0 202 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 DCDC5Q6ZRR9 648 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 CEACAM19Q7Z692 300 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 D2HGDHQ8N465 521 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 M1APQ8TC57 530 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 MSI2Q96DH6 328 aaKnown RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ABHD17AQ96GS6 310 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 SLC45A3Q96JT2 553 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 INPP5KQ9BT40 448 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 SHARPINQ9H0F6 387 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 KAT8Q9H7Z6 458 aaKnown RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 POMPQ9Y244 141 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 CCDC168Q8NDH2 2452 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ALPK2Q86TB3 2170 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 MN1Q10571 1320 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 C13orf42A0A1B0GVH6 325 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 B8ZZF3 427 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 K7ENP7 123 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 HSPB6O14558 160 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 WDR1O75083 606 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 BCAS1O75363 584 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 QDPRP09417 244 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 RPS2P15880 293 aaKnown RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 SRD5A2P31213 254 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 NR1H2P55055 460 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 TRAM1Q15629 374 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 SPATS1Q496A3 300 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 GTDC1Q4AE62 458 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 PAN3Q58A45 887 aaKnown RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 INO80CQ6PI98 192 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF322Q6U7Q0 402 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 STX12Q86Y82 276 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ZNF321PQ8N8H1 164 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 CSNK2A3Q8NEV1 391 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ALKBH3Q96Q83 286 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ATOH8Q96SQ7 321 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 SLC6A7Q99884 636 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 SLC26A1Q9H2B4 701 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 OR52D1Q9H346 318 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 S100A14Q9HCY8 104 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 MEPEQ9NQ76 525 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 FBXO34Q9NWN3 711 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 MUC22E2RYF6 1773 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 CLPXO76031 633 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 WISP1O95388 367 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 SP1P08047 785 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 TNFRSF1BP20333 461 aa6.58□□□□□ -1.36
CNOT4-206ENST00000428680 RBM34P42696 430 aaKnown RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 AP2S1P53680 142 aaPredicted RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 ROR2Q01974 943 aaKnown RBP6.58□□□□□ -1.36
CNOT4-206ENST00000428680 PPA1Q15181 289 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms