RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 MELKQ14680 651 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 TOMM20Q15388 145 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 LYPD4Q6UWN0 246 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 SLC35F2Q8IXU6 374 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 OR14L1PQ8NHC6 308 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 SMAP2Q8WU79 429 aaPredicted RBP16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 HAS2Q92819 552 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 NUAK2Q9H093 628 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 MARCH7Q9H992 704 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 ISG20L2Q9H9L3 353 aaKnown RBP16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 NPIPA1Q9UND3 350 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 MED12Q93074 2177 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 SPENQ96T58 3664 aaKnown RBP16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 NBASA2RRP1 2371 aa16.04■□□□□ 0.16
AC055811.2-201ENST00000427497 TNRC6AQ8NDV7 1962 aaKnown RBP16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 GJE1A6NN92 205 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 NME2P1O60361 137 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 SELENOFO60613 162 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 BCL10O95999 233 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 SP1P08047 785 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 ZNF182P17025 639 aaPredicted RBP16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 NME2P22392 152 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 GDF1P27539 372 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 NAA10P41227 235 aaPredicted RBP16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 LSM3P62310 102 aaKnown RBP16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 BDH1Q02338 343 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 TIMM50Q3ZCQ8 353 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 LIPKQ5VXJ0 399 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 KLHL15Q96M94 604 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 KCNK17Q96T54 332 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 MFRPQ9BY79 579 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 ZNF703Q9H7S9 590 aaPredicted RBP16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 KLF13Q9Y2Y9 288 aaPredicted RBP16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 CNTRLQ7Z7A1 2325 aa16.03■□□□□ 0.16
AC055811.2-201ENST00000427497 IGLV1-36A0A0B4J1U3 117 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 A0A0J9YW62 118 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 FAM171A2A8MVW0 826 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 AKAP8O43823 692 aaKnown RBP16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 KLRB1Q12918 225 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 WIPI1Q5MNZ9 446 aaPredicted RBP16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 SLC25A25Q6KCM7 469 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 ASB18Q6ZVZ8 466 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 SSX6Q7RTT6 188 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 WDFY1Q8IWB7 410 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 TIGD4Q8IY51 512 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 ZNF511Q8NB15 262 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 NDNFQ8TB73 568 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 TXNDC15Q96J42 360 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 OXGR1Q96P68 337 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 TSPAN10Q9H1Z9 355 aaPredicted RBP16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 BABAM2Q9NXR7 383 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 KLHL13Q9P2N7 655 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 B9D1Q9UPM9 204 aa16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 SF3B6Q9Y3B4 125 aaKnown RBP16.02■□□□□ 0.16
AC055811.2-201ENST00000427497 ALPK2Q86TB3 2170 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 FLNCQ14315 2725 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 TRAF3IP2O43734 574 aaPredicted RBP16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 AHCYL1O43865 530 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 EIF1BO60739 113 aaKnown RBP16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 GPX5O75715 221 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 HPNP05981 417 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 PAX7P23759 505 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 CRYBB2P43320 205 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 HCCSP53701 268 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 GFRA1P56159 465 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 CSNK2A1P68400 391 aaPredicted RBP16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 GDPGP1Q6ZNW5 385 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 SLC16A9Q7RTY1 509 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 GGNQ86UU5 652 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 UEVLDQ8IX04 471 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 RFLNBQ8N5W9 214 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 UFD1Q92890 307 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 CHCHD6Q9BRQ6 235 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 MED29Q9NX70 200 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 B4GALT7Q9UBV7 327 aa16.02■□□□□ 0.15
AC055811.2-201ENST00000427497 KIAA1549Q9HCM3 1950 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 LINC01387J3KSC0 135 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 DNPH1O43598 174 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 RAMP1O60894 148 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 TRAPPC6AO75865 159 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 GLSO94925 669 aaPredicted RBP16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 MT-ND5P03915 603 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 KLK2P20151 261 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 PSMA1P25786 263 aaKnown RBP16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 UGT2B10P36537 528 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 CAPZA2P47755 286 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 CENPAP49450 140 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 HSF2Q03933 536 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 HYAL4Q2M3T9 481 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 TMEM225Q6GV28 225 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 KLBQ86Z14 1044 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 SYS1Q8N2H4 156 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 DYNC2LI1Q8TCX1 351 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 SCMH1Q96GD3 660 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 SFXN2Q96NB2 322 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 CENPOQ9BU64 300 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 TTTY12Q9BZ98 90 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 STUB1Q9UNE7 303 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 COPS3Q9UNS2 423 aa16.01■□□□□ 0.15
AC055811.2-201ENST00000427497 RASD1Q9Y272 281 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms