RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 SKP2Q13309 424 aa2.56□□□□□ -2
PMS1-209ENST00000424059 GK2Q14410 553 aaPredicted RBP2.56□□□□□ -2
PMS1-209ENST00000424059 NFATC4Q14934 902 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TAF13Q15543 124 aa2.56□□□□□ -2
PMS1-209ENST00000424059 MRPL23Q16540 153 aaKnown RBP2.56□□□□□ -2
PMS1-209ENST00000424059 ISXQ2M1V0 245 aa2.56□□□□□ -2
PMS1-209ENST00000424059 ITPRIPL2Q3MIP1 535 aa2.56□□□□□ -2
PMS1-209ENST00000424059 PARP15Q460N3 678 aa2.56□□□□□ -2
PMS1-209ENST00000424059 ACSM3Q53FZ2 586 aa2.56□□□□□ -2
PMS1-209ENST00000424059 CXorf66Q5JRM2 361 aaPredicted RBP2.56□□□□□ -2
PMS1-209ENST00000424059 CBWD5Q5RIA9 395 aa2.56□□□□□ -2
PMS1-209ENST00000424059 RBM48Q5RL73 367 aaKnown RBP2.56□□□□□ -2
PMS1-209ENST00000424059 TIMM23BQ5SRD1 257 aa2.56□□□□□ -2
PMS1-209ENST00000424059 FNBP1LQ5T0N5 605 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SAMD13Q5VXD3 122 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TMEM42Q69YG0 159 aa2.56□□□□□ -2
PMS1-209ENST00000424059 DGAT2L7PQ6IED9 249 aa2.56□□□□□ -2
PMS1-209ENST00000424059 ZNF549Q6P9A3 640 aa2.56□□□□□ -2
PMS1-209ENST00000424059 CBLN3Q6UW01 205 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TMEM107Q6UX40 140 aa2.56□□□□□ -2
PMS1-209ENST00000424059 ZDHHC24Q6UX98 284 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SIGLEC15Q6ZMC9 328 aa2.56□□□□□ -2
PMS1-209ENST00000424059 Q7L0L9 218 aa2.56□□□□□ -2
PMS1-209ENST00000424059 DPY19L4Q7Z388 723 aa2.56□□□□□ -2
PMS1-209ENST00000424059 CTU1Q7Z7A3 348 aaKnown RBP2.56□□□□□ -2
PMS1-209ENST00000424059 PTOV1Q86YD1 416 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TMEM25Q86YD3 366 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SNX29P2Q8IUI4 249 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SKA3Q8IX90 412 aa2.56□□□□□ -2
PMS1-209ENST00000424059 PELI3Q8N2H9 469 aa2.56□□□□□ -2
PMS1-209ENST00000424059 ATPAF2Q8N5M1 289 aa2.56□□□□□ -2
PMS1-209ENST00000424059 ST6GALNAC3Q8NDV1 305 aa2.56□□□□□ -2
PMS1-209ENST00000424059 OR10G3Q8NGC4 313 aa2.56□□□□□ -2
PMS1-209ENST00000424059 OR4K2Q8NGD2 314 aa2.56□□□□□ -2
PMS1-209ENST00000424059 OR8U1Q8NH10 309 aa2.56□□□□□ -2
PMS1-209ENST00000424059 OR51F2Q8NH61 342 aa2.56□□□□□ -2
PMS1-209ENST00000424059 OR5AK3PQ8NH89 298 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TMEM163Q8TC26 289 aa2.56□□□□□ -2
PMS1-209ENST00000424059 U2AF1L4Q8WU68 220 aaKnown RBP2.56□□□□□ -2
PMS1-209ENST00000424059 CCDC107Q8WV48 283 aa2.56□□□□□ -2
PMS1-209ENST00000424059 FAR1Q8WVX9 515 aa2.56□□□□□ -2
PMS1-209ENST00000424059 PIH1D2Q8WWB5 315 aa2.56□□□□□ -2
PMS1-209ENST00000424059 C1orf54Q8WWF1 131 aa2.56□□□□□ -2
PMS1-209ENST00000424059 IGFBPL1Q8WX77 278 aa2.56□□□□□ -2
PMS1-209ENST00000424059 PIGCQ92535 297 aa2.56□□□□□ -2
PMS1-209ENST00000424059 WDR34Q96EX3 536 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TMEM19Q96HH6 336 aa2.56□□□□□ -2
PMS1-209ENST00000424059 MS4A14Q96JA4 679 aa2.56□□□□□ -2
PMS1-209ENST00000424059 OR52B2Q96RD2 323 aa2.56□□□□□ -2
PMS1-209ENST00000424059 MTERF1Q99551 399 aaKnown RBP2.56□□□□□ -2
PMS1-209ENST00000424059 CMSS1Q9BQ75 279 aaKnown RBP2.56□□□□□ -2
PMS1-209ENST00000424059 NUDT22Q9BRQ3 303 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TIMM29Q9BSF4 260 aa2.56□□□□□ -2
PMS1-209ENST00000424059 OSBPL11Q9BXB4 747 aa2.56□□□□□ -2
PMS1-209ENST00000424059 FTHL17Q9BXU8 183 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SNHG12Q9BXW3 62 aa2.56□□□□□ -2
PMS1-209ENST00000424059 NMNAT2Q9BZQ4 307 aa2.56□□□□□ -2
PMS1-209ENST00000424059 ZDHHC6Q9H6R6 413 aa2.56□□□□□ -2
PMS1-209ENST00000424059 NANOGQ9H9S0 305 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SPAG4Q9NPE6 437 aa2.56□□□□□ -2
PMS1-209ENST00000424059 FSCN3Q9NQT6 498 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TMEM45AQ9NWC5 275 aa2.56□□□□□ -2
PMS1-209ENST00000424059 RCE1Q9Y256 329 aa2.56□□□□□ -2
PMS1-209ENST00000424059 ADAMTS12P58397 1594 aa2.56□□□□□ -2
PMS1-209ENST00000424059 FAM135AQ9P2D6 1515 aa2.56□□□□□ -2
PMS1-209ENST00000424059 PLCH2O75038 1416 aa2.56□□□□□ -2
PMS1-209ENST00000424059 MYH15Q9Y2K3 1946 aa2.56□□□□□ -2
PMS1-209ENST00000424059 LOC100509620A0A075B734 347 aa2.56□□□□□ -2
PMS1-209ENST00000424059 A0A1B0GVI7 797 aa2.56□□□□□ -2
PMS1-209ENST00000424059 OR6C68A6NDL8 312 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SH2D7A6NKC9 451 aaPredicted RBP2.56□□□□□ -2
PMS1-209ENST00000424059 FAM74A7A6NL05 159 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TMEM233B4DJY2 109 aa2.56□□□□□ -2
PMS1-209ENST00000424059 CLDN34H7C241 214 aa2.56□□□□□ -2
PMS1-209ENST00000424059 H7C417 338 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SDHDO14521 159 aa2.56□□□□□ -2
PMS1-209ENST00000424059 CTDSPLO15194 276 aa2.56□□□□□ -2
PMS1-209ENST00000424059 NBR2O15453 112 aa2.56□□□□□ -2
PMS1-209ENST00000424059 NDUFS4O43181 175 aa2.56□□□□□ -2
PMS1-209ENST00000424059 DHHO43323 396 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SYNGR3O43761 229 aa2.56□□□□□ -2
PMS1-209ENST00000424059 TIMM8AO60220 97 aaPredicted RBP2.56□□□□□ -2
PMS1-209ENST00000424059 SOX15O60248 233 aa2.56□□□□□ -2
PMS1-209ENST00000424059 FKBP6O75344 327 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SH3BGRLO75368 114 aa2.56□□□□□ -2
PMS1-209ENST00000424059 KHDRBS3O75525 346 aaKnown RBP2.56□□□□□ -2
PMS1-209ENST00000424059 EGFP01133 1207 aa2.56□□□□□ -2
PMS1-209ENST00000424059 PDYNP01213 254 aa2.56□□□□□ -2
PMS1-209ENST00000424059 IGHV2-5P01817 119 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SHBGP04278 402 aa2.56□□□□□ -2
PMS1-209ENST00000424059 CA3P07451 260 aa2.56□□□□□ -2
PMS1-209ENST00000424059 BPGMP07738 259 aa2.56□□□□□ -2
PMS1-209ENST00000424059 FGF2P09038 288 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SLC35G4P0C7Q5 338 aa2.56□□□□□ -2
PMS1-209ENST00000424059 PET100P0DJ07 73 aa2.56□□□□□ -2
PMS1-209ENST00000424059 SPP1P10451 314 aa2.56□□□□□ -2
PMS1-209ENST00000424059 IGFBP2P18065 325 aa2.56□□□□□ -2
PMS1-209ENST00000424059 RAB3BP20337 219 aa2.56□□□□□ -2
PMS1-209ENST00000424059 KLRC2P26717 231 aa2.56□□□□□ -2
PMS1-209ENST00000424059 MST1P26927 711 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms