RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 SULT1B1O43704 296 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 B3GALT2O43825 422 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 GPRIN2O60269 458 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 RBBP9O75884 186 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 CD3DP04234 171 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 PVRP15151 417 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 CALCRP30988 508 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 CDKN2AP42771 156 aaKnown RBP13.02□□□□□ -0.33
MSH5-206ENST00000423982 RBMS2Q15434 407 aaKnown RBP13.02□□□□□ -0.33
MSH5-206ENST00000423982 PRICKLE4Q2TBC4 344 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 LINC01590Q5TEZ4 76 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 LEG1Q6P5S2 330 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 HSD17B13Q7Z5P4 300 aaPredicted RBP13.02□□□□□ -0.33
MSH5-206ENST00000423982 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.02□□□□□ -0.33
MSH5-206ENST00000423982 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.33
MSH5-206ENST00000423982 MRM2Q9UI43 246 aaKnown RBP13.02□□□□□ -0.33
MSH5-206ENST00000423982 RAB40ALP0C0E4 278 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 GTF2F2P13984 249 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 MPGP29372 298 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 MECP2P51608 486 aaKnown RBP13.01□□□□□ -0.33
MSH5-206ENST00000423982 MGAT2Q10469 447 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 STK11Q15831 433 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 PRRT3Q5FWE3 981 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 OR52R1Q8NGF1 315 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 OR10G6Q8NH81 332 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 RAB40AQ8WXH6 277 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 KLHDC7BQ96G42 594 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 OR2A5Q96R48 311 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 ALG12Q9BV10 488 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 ZNF416Q9BWM5 594 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 DTX4Q9Y2E6 619 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 CUL9Q8IWT3 2517 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 TRAV14DV4A0A0A6YYC5 116 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 OR2W5A6NFC9 320 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 METTL12A8MUP2 240 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 BLOC1S5-TXNDC5H3BN57 136 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 H7C417 338 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 NDUFA2O43678 99 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 LIPCP11150 499 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 TLX1P31314 330 aaPredicted RBP13.01□□□□□ -0.33
MSH5-206ENST00000423982 CAPZA2P47755 286 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 CCR5P51681 352 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 Q499Y3 187 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 LRRC37A5PQ49AS3 106 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 EXOSC6Q5RKV6 272 aaKnown RBP13.01□□□□□ -0.33
MSH5-206ENST00000423982 SLC35F3Q8IY50 421 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 EID2Q8N6I1 236 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 OR10K1Q8NGX5 313 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 OR10Z1Q8NGY1 313 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 OR5AK2Q8NH90 309 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
MSH5-206ENST00000423982 SERINC2Q96SA4 455 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 MNTQ99583 582 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 SRA1Q9HD15 236 aaKnown RBP13.01□□□□□ -0.33
MSH5-206ENST00000423982 MTFP1Q9UDX5 166 aa13.01□□□□□ -0.33
MSH5-206ENST00000423982 TRAV18A0A075B6X5 111 aa13□□□□□ -0.33
MSH5-206ENST00000423982 LAMTOR5O43504 91 aa13□□□□□ -0.33
MSH5-206ENST00000423982 UPK3AO75631 287 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ANXA2P07355 339 aaKnown RBP13□□□□□ -0.33
MSH5-206ENST00000423982 RABIFP47224 123 aa13□□□□□ -0.33
MSH5-206ENST00000423982 AKR1C2P52895 323 aa13□□□□□ -0.33
MSH5-206ENST00000423982 AKR1C1Q04828 323 aa13□□□□□ -0.33
MSH5-206ENST00000423982 FZD2Q14332 565 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ZNF169Q14929 603 aaPredicted RBP13□□□□□ -0.33
MSH5-206ENST00000423982 LPAL2Q16609 132 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ZNF684Q5T5D7 378 aa13□□□□□ -0.33
MSH5-206ENST00000423982 TMED4Q7Z7H5 227 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ZNF761Q86XN6 746 aaPredicted RBP13□□□□□ -0.33
MSH5-206ENST00000423982 NAXDQ8IW45 347 aa13□□□□□ -0.33
MSH5-206ENST00000423982 WNT2BQ93097 391 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ZNF75AQ96N20 296 aa13□□□□□ -0.33
MSH5-206ENST00000423982 TIMM29Q9BSF4 260 aa13□□□□□ -0.33
MSH5-206ENST00000423982 FSCN3Q9NQT6 498 aa13□□□□□ -0.33
MSH5-206ENST00000423982 FBXO4Q9UKT5 387 aa13□□□□□ -0.33
MSH5-206ENST00000423982 SMIM10L1P0DMW3 83 aa13□□□□□ -0.33
MSH5-206ENST00000423982 CALCBP10092 127 aa13□□□□□ -0.33
MSH5-206ENST00000423982 DHPSP49366 369 aaPredicted RBP13□□□□□ -0.33
MSH5-206ENST00000423982 RPS15AP62244 130 aaKnown RBP13□□□□□ -0.33
MSH5-206ENST00000423982 PSG6Q00889 435 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ILF3Q12906 894 aaKnown RBP eCLIP13□□□□□ -0.338e-7■■□□□ 11.6
MSH5-206ENST00000423982 ATXN7L3Q14CW9 347 aaPredicted RBP13□□□□□ -0.33
MSH5-206ENST00000423982 LINC00518Q8N0U6 118 aa13□□□□□ -0.33
MSH5-206ENST00000423982 TMEM105Q8N8V8 129 aa13□□□□□ -0.33
MSH5-206ENST00000423982 LSM14AQ8ND56 463 aaKnown RBP13□□□□□ -0.33
MSH5-206ENST00000423982 PXT1Q8NFP0 134 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ASB12Q8WXK4 309 aa13□□□□□ -0.33
MSH5-206ENST00000423982 SMIM10Q96HG1 83 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ADAD1Q96M93 576 aaKnown RBP13□□□□□ -0.33
MSH5-206ENST00000423982 FOXN4Q96NZ1 517 aa13□□□□□ -0.33
MSH5-206ENST00000423982 EXO5Q9H790 373 aa13□□□□□ -0.33
MSH5-206ENST00000423982 PCDHB16Q9NRJ7 776 aa13□□□□□ -0.33
MSH5-206ENST00000423982 RXFP3Q9NSD7 469 aa13□□□□□ -0.33
MSH5-206ENST00000423982 ZNF337Q9Y3M9 751 aa13□□□□□ -0.33
MSH5-206ENST00000423982 KCNAB3O43448 404 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 CDC123O75794 336 aaPredicted RBP12.99□□□□□ -0.33
MSH5-206ENST00000423982 CD27P26842 260 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 AQP2P41181 271 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 LGALS3BPQ08380 585 aa12.99□□□□□ -0.33
MSH5-206ENST00000423982 EIF2B5Q13144 721 aaKnown RBP12.99□□□□□ -0.33
MSH5-206ENST00000423982 NKAIN2Q5VXU1 208 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms