RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 CALCBP10092 127 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 RPS15P62841 145 aaKnown RBP11.39□□□□□ -0.59
CLCN4-203ENST00000421085 TAF9Q16594 264 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 OR51A4Q8NGJ6 313 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 INSM2Q96T92 566 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-203ENST00000421085 ACOXLQ9NUZ1 547 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 OR5H14A6NHG9 310 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 RFX2P48378 723 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 RFLNAQ6ZTI6 216 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 PAQR9Q6ZVX9 377 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 AMIGO3Q86WK7 504 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 NKAIN3Q8N8D7 197 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 GMLQ99445 158 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 TEAD3Q99594 435 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 NECAP2Q9NVZ3 263 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 HBQ1P09105 142 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 ZNF865P0CJ78 1059 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-203ENST00000421085 ECI1P42126 302 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 PCBD1P61457 104 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 HAGHQ16775 308 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 TMEM99Q8N816 258 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 GAREM1Q9H706 876 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 HRASLSQ9HDD0 168 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 XRCC3O43542 346 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 GLIPR1L1Q6UWM5 242 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 OR1M1Q8NGA1 313 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 APH1BQ8WW43 257 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 ABHD6Q9BV23 337 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 CDCP1Q9H5V8 836 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 TCRBV5S1A1TA0A578 114 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 SLC5A10A0PJK1 596 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 HSD17B6O14756 317 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 GLCEO94923 617 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 TPOP07202 933 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 NME1P15531 152 aaKnown RBP11.39□□□□□ -0.59
CLCN4-203ENST00000421085 HNRNPA1L2Q32P51 320 aaKnown RBP11.39□□□□□ -0.59
CLCN4-203ENST00000421085 TEX261Q6UWH6 196 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 ZNF852Q6ZMS4 543 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 NECAP1Q8NC96 275 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 OR5L1Q8NGL2 311 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 MS4A8Q9BY19 250 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 IFT22Q9H7X7 185 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 U3KQ87 197 aa11.39□□□□□ -0.59
CLCN4-203ENST00000421085 CICQ96RK0 1608 aaPredicted RBP11.39□□□□□ -0.59
CLCN4-203ENST00000421085 EVX1P49640 407 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 SLC7A9P82251 487 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 RNF212Q495C1 297 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 SLC35D3Q5M8T2 416 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 FAM74A1Q5RGS3 127 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ANGPTL5Q86XS5 388 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 LGI3Q8N145 548 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 CPXM2Q8N436 756 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 CLRN3Q8NCR9 226 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ASIC5Q9NY37 505 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 AK3Q9UIJ7 227 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 TRBV11-1A0A0K0K1C0 115 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 PRSS38A1L453 326 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ADAMTS4O75173 837 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 RPA2P15927 270 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ELLP55199 621 aaPredicted RBP11.38□□□□□ -0.59
CLCN4-203ENST00000421085 PFN3P60673 137 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 HTR3DQ70Z44 454 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 MMP21Q8N119 569 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ZNF845Q96IR2 970 aaPredicted RBP11.38□□□□□ -0.59
CLCN4-203ENST00000421085 SLC6A17Q9H1V8 727 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ZCCHC4Q9H5U6 513 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 OBP2BQ9NPH6 170 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 MYO18AQ92614 2054 aaKnown RBP11.38□□□□□ -0.59
CLCN4-203ENST00000421085 NUP188Q5SRE5 1749 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 TAAR5O14804 337 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ACHEP22303 614 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 EMP3P54852 163 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 OR10A3P58181 314 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 MAT1AQ00266 395 aaKnown RBP11.38□□□□□ -0.59
CLCN4-203ENST00000421085 FABP5Q01469 135 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ACSM5Q6NUN0 579 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 CLEC9AQ6UXN8 241 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ANKRD53Q8N9V6 530 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 OPALINQ96PE5 141 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 H0YGG7 62 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 POU3F2P20265 443 aaPredicted RBP11.38□□□□□ -0.59
CLCN4-203ENST00000421085 CLDN17P56750 224 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ZBTB37Q5TC79 503 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 C9orf135Q5VTT2 229 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.38□□□□□ -0.59
CLCN4-203ENST00000421085 NKAIN4Q8IVV8 208 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 TCTE3Q8IZS6 198 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 FAM26EQ8N5C1 309 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 HCFC1R1Q9NWW0 138 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 BLACEA4D250 179 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 LRP5LA4QPB2 252 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ZNF587BE7ETH6 402 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 CSF2RAP15509 400 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 ARNTP27540 789 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 FAM71E1Q6IPT2 247 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 DBX2Q6ZNG2 339 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 Q6ZRG5 221 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 KLHDC8BQ8IXV7 354 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 TCEAL8Q8IYN2 117 aa11.38□□□□□ -0.59
CLCN4-203ENST00000421085 PRSS35Q8N3Z0 413 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms