RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 CFPP27918 469 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 RAB14P61106 215 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 GRM7Q14831 915 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 NR0B2Q15466 257 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 ALG10Q5BKT4 473 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 LY6G6FQ5SQ64 297 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 CHRDL2Q6WN34 429 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 TMPRSS12Q86WS5 348 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 PM20D2Q8IYS1 436 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 FAM160A2Q8N612 972 aaPredicted RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 ZBTB44Q8NCP5 570 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 C1orf216Q8TAB5 229 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 RBPMSQ93062 196 aaKnown RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 PNPLA2Q96AD5 504 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 MRGPRFQ96AM1 343 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 ADAD1Q96M93 576 aaKnown RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 MAP3K3Q99759 626 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 NXF5Q9H1B4 397 aaKnown RBP8.92□□□□□ -0.98
SS18-203ENST00000415083 NUP50Q9UKX7 468 aa8.92□□□□□ -0.98
SS18-203ENST00000415083 WDR87Q6ZQQ6 2873 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 DOK2O60496 412 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 LMX1BO60663 402 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 PRAF2O60831 178 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 HIST1H2ABP04908 130 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 MAOBP27338 520 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ART1P52961 327 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 MAZP56270 477 aaKnown RBP8.91□□□□□ -0.98
SS18-203ENST00000415083 SLC37A1P57057 533 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 KIF26BQ2KJY2 2108 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 EEF1A1P5Q5VTE0 462 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 HIST3H2AQ7L7L0 130 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 PRR22Q8IZ63 422 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 FAM174AQ8TBP5 190 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.91□□□□□ -0.98
SS18-203ENST00000415083 HIST1H2ACQ93077 130 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 TMEM106AQ96A25 262 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 S100A16Q96FQ6 103 aaKnown RBP8.91□□□□□ -0.98
SS18-203ENST00000415083 TMPRSS13Q9BYE2 586 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ADAM19Q9H013 955 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 WDR13Q9H1Z4 485 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 SYT4Q9H2B2 425 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 LANCL2Q9NS86 450 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ADAMTS20P59510 1910 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ECDO95905 644 aaPredicted RBP8.91□□□□□ -0.98
SS18-203ENST00000415083 IFNA7P01567 189 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 BGLAPP02818 100 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ANOS1P23352 680 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ANKRD16Q6P6B7 361 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 LYPD6Q86Y78 171 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 C7orf61Q8IZ16 206 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ZDHHC1Q8WTX9 485 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 NSMAFQ92636 917 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 C4orf45Q96LM5 186 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 ZNF285Q96NJ3 590 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 LMAN2LQ9H0V9 348 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 EVA1AQ9H8M9 152 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 TAS2R10Q9NYW0 307 aa8.91□□□□□ -0.98
SS18-203ENST00000415083 NAP1L6A6NFF2 107 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PRAMEF2O60811 474 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 SRSF10O75494 262 aaKnown RBP8.9□□□□□ -0.98
SS18-203ENST00000415083 TSPAN9O75954 239 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 RAB40ALP0C0E4 278 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 CSF2RBP32927 897 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 FOXL2P58012 376 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PRPS1P60891 318 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PSMA6P60900 246 aaKnown RBP8.9□□□□□ -0.98
SS18-203ENST00000415083 ZNF117Q03924 483 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 MOGAT2Q3SYC2 334 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 ALKAL2Q6UX46 152 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 LRRN1Q6UXK5 716 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 TMEM184AQ6ZMB5 413 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PRSS42Q7Z5A4 293 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 RAB40AQ8WXH6 277 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 ADIPOR1Q96A54 375 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 C8orf44Q96CB5 159 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 MESP1Q9BRJ9 268 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 SLC19A3Q9BZV2 496 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 NRSN2Q9GZP1 204 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 STEAP1Q9UHE8 339 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 SPACA6W5XKT8 324 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 ARID1BQ8NFD5 2236 aaPredicted RBP8.9□□□□□ -0.98
SS18-203ENST00000415083 hCG_1807616A0A1W2PRN6 198 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 GGT3PA6NGU5 568 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 ACOT7O00154 380 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PDCD5O14737 125 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PPM1BO75688 479 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 MPZL1O95297 269 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 CD3DP04234 171 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 ZNF735P0CB33 412 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 CD37P11049 281 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 ZNF35P13682 527 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 IL11P20809 199 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 NFYAP23511 347 aaPredicted RBP8.9□□□□□ -0.98
SS18-203ENST00000415083 INSM1Q01101 510 aaPredicted RBP8.9□□□□□ -0.98
SS18-203ENST00000415083 HHEXQ03014 270 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 LGALS3BPQ08380 585 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 MEP1BQ16820 701 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PCGF3Q3KNV8 242 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 PRAMEF17Q5VTA0 474 aa8.9□□□□□ -0.98
SS18-203ENST00000415083 B3GNTL1Q67FW5 361 aaPredicted RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms