RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 NPTNQ9Y639 398 aa13.24□□□□□ -0.29
CPNE1-208ENST00000414711 CLDN24A6NM45 220 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 SNX3O60493 162 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 MPIG6BO95866 241 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 SBK2P0C263 348 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 ERVS71-1P61550 626 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 RAB39AQ14964 217 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 LSM12Q3MHD2 195 aaKnown RBP13.23□□□□□ -0.29
CPNE1-208ENST00000414711 RFTN2Q52LD8 501 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-208ENST00000414711 ESCO2Q56NI9 601 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 METTL21CQ5VZV1 264 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 AP1ARQ63HQ0 302 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 ZNF813Q6ZN06 617 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 PIGWQ7Z7B1 504 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 HMGN2P46Q86SG4 172 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 CPEB3Q8NE35 698 aaKnown RBP13.23□□□□□ -0.29
CPNE1-208ENST00000414711 SSMEM1Q8WWF3 244 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 MOAP1Q96BY2 351 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 FAM71F1Q96KD3 344 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-208ENST00000414711 FCRL1Q96LA6 429 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 OR52B2Q96RD2 323 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 EBF4Q9BQW3 602 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 OR51B6Q9H340 312 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 DENND2DQ9H6A0 471 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-208ENST00000414711 ASIC5Q9NY37 505 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 ZNF224Q9NZL3 707 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 NOP53Q9NZM5 478 aaKnown RBP13.23□□□□□ -0.29
CPNE1-208ENST00000414711 EGFL7Q9UHF1 273 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 FBXL3Q9UKT7 428 aa13.23□□□□□ -0.29
CPNE1-208ENST00000414711 TANC2Q9HCD6 1990 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 DUXAA6NLW8 204 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 M0R3G1 203 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 IGHV1-46P01743 117 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 LCKP06239 509 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 B4GALT1P15291 398 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 ZNF43P17038 809 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 HPCAL1P37235 193 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 ZNF81P51508 661 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 KCNJ10P78508 379 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 SF3A3Q12874 501 aaKnown RBP eCLIP13.22□□□□□ -0.295e-8■□□□□ 11
CPNE1-208ENST00000414711 HNRNPA0Q13151 305 aaKnown RBP13.22□□□□□ -0.29
CPNE1-208ENST00000414711 TYW3Q6IPR3 259 aaKnown RBP13.22□□□□□ -0.29
CPNE1-208ENST00000414711 LRRN1Q6UXK5 716 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 KDM8Q8N371 416 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 PIK3C3Q8NEB9 887 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 C10orf82Q8WW14 230 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 C11orf40Q8WZ69 217 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 OR5P2Q8WZ92 322 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 CNOT9Q92600 299 aaKnown RBP13.22□□□□□ -0.29
CPNE1-208ENST00000414711 PHF21AQ96BD5 680 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 NEURL3Q96EH8 262 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 PRPF18Q99633 342 aaKnown RBP13.22□□□□□ -0.29
CPNE1-208ENST00000414711 RABEP2Q9H5N1 569 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 FN3KRPQ9HA64 309 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 MRGBPQ9NV56 204 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 GIMAP2Q9UG22 337 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 WDR45Q9Y484 360 aa13.22□□□□□ -0.29
CPNE1-208ENST00000414711 F5H0A9 414 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-208ENST00000414711 NDUFAB1O14561 156 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 UBDO15205 165 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 SPRY3O43610 288 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 C6orf47O95873 294 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 FUT4P22083 530 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 CXCR1P25024 350 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 SOAT1P35610 550 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 RAB1AP62820 205 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 PAX2Q02962 417 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 RBBP4Q09028 425 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 DBPQ10586 325 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-208ENST00000414711 MOGQ16653 247 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 GSTA3Q16772 222 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 TMEM155Q4W5P6 130 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 PHYHD1Q5SRE7 291 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 IL23RQ5VWK5 629 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 Q6ZSV7 163 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 ZNF584Q8IVC4 421 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 C1orf174Q8IYL3 243 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 TMEM123Q8N131 208 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 PAQR4Q8N4S7 273 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-208ENST00000414711 POU5F2Q8N7G0 328 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 OR7A2PQ8NGA2 310 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 ZNF519Q8TB69 540 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 BCAS4Q8TDM0 211 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 OR2M2Q96R28 347 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 DCLRE1CQ96SD1 692 aaKnown RBP13.21□□□□□ -0.29
CPNE1-208ENST00000414711 C1orf50Q9BV19 199 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 EGLN1Q9GZT9 426 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.21□□□□□ -0.29
CPNE1-208ENST00000414711 DCAF16Q9NXF7 216 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 ARL2BPQ9Y2Y0 163 aa13.21□□□□□ -0.29
CPNE1-208ENST00000414711 E9PBE3 544 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 FAAHO00519 579 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 UBL3O95164 117 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 LAMP1P11279 417 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 IDO1P14902 403 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 UQCRBP14927 111 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 MATN1P21941 496 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 STX1BP61266 288 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 CBX1P83916 185 aa13.2□□□□□ -0.3
CPNE1-208ENST00000414711 EGR3Q06889 387 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms