RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 ITGA2P17301 1181 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 CALCRP30988 508 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 GIPRP48546 466 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 SLC9A3P48764 834 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 CTXN1P60606 82 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 RAB1AP62820 205 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 MYBPC1Q00872 1141 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 TNK1Q13470 666 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 TOP3AQ13472 1001 aaPredicted RBP9.73□□□□□ -0.85
RFFL-204ENST00000414419 C11orf71Q6IPW1 123 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 MBOAT2Q6ZWT7 520 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 SLC22A24Q8N4F4 322 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 ANKS4BQ8N8V4 417 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 FAM156AQ8NDB6 213 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 NOXO1Q8NFA2 376 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 NUP37Q8NFH4 326 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 OR51A7Q8NH64 312 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 ASB10Q8WXI3 467 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 MCHR2Q969V1 340 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 MCUR1Q96AQ8 359 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 ZNF347Q96SE7 839 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 SMR3AQ99954 134 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 KCNN2Q9H2S1 579 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 TXNIPQ9H3M7 391 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 ANKRD19PQ9H560 264 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 GORASP2Q9H8Y8 452 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 RNF121Q9H920 327 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 SEC61A2Q9H9S3 476 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 NMNAT1Q9HAN9 279 aaPredicted RBP9.73□□□□□ -0.85
RFFL-204ENST00000414419 KRCC1Q9NPI7 259 aaPredicted RBP9.73□□□□□ -0.85
RFFL-204ENST00000414419 MAN2C1Q9NTJ4 1040 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 ARL8BQ9NVJ2 186 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 TMEM38BQ9NVV0 291 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 B3GNT2Q9NY97 397 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 MAGEL2Q9UJ55 1249 aa9.73□□□□□ -0.85
RFFL-204ENST00000414419 TRAV27A0A087WT01 109 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 A0A087WUU8 490 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 IGHV2OR16-5A0A0B4J2B6 119 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 B9A039 149 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 H7C417 338 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 PDE5AO76074 875 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 OR4A8P0C604 315 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 TSPAN19P0C672 248 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 HSD17B1P14061 328 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 RHCEP18577 417 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 NPR2P20594 1047 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 MAKP20794 623 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 RPL4P36578 427 aaKnown RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 GUCA1AP43080 201 aaPredicted RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 DSCR9P59020 149 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 RPL27P61353 136 aaKnown RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 GALK2Q01415 458 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 RUNX1T1Q06455 604 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 CD47Q08722 323 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 DAG1Q14118 895 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 SLC36A2Q495M3 483 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 FGD3Q5JSP0 725 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 TMEM53Q6P2H8 277 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 TBPL2Q6SJ96 375 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 CLEC2AQ6UVW9 174 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 Q71RC1 249 aaPredicted RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 SLC16A14Q7RTX9 510 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 DPPA2Q7Z7J5 298 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 MYPOPQ86VE0 399 aaPredicted RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 MEX3DQ86XN8 651 aaKnown RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 SKA3Q8IX90 412 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 DEFB107AQ8IZN7 70 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 RBM15BQ8NDT2 890 aaKnown RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 FNDC8Q8TC99 324 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 PYURFQ96I23 114 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 NSMCE2Q96MF7 247 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 RBP7Q96R05 134 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 TNFRSF13CQ96RJ3 184 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 VRK1Q99986 396 aaPredicted RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 MRPL13Q9BYD1 178 aaKnown RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 NOX3Q9HBY0 568 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 FBXO9Q9UK97 447 aaPredicted RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 TMEM5Q9Y2B1 443 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 FKBP7Q9Y680 259 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 V9GYQ6 96 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 RTTNQ86VV8 2226 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 CR1P17927 2039 aa9.72□□□□□ -0.85
RFFL-204ENST00000414419 CHD3Q12873 2000 aaKnown RBP9.72□□□□□ -0.85
RFFL-204ENST00000414419 CSPG4Q6UVK1 2322 aa9.71□□□□□ -0.85
RFFL-204ENST00000414419 TLN2Q9Y4G6 2542 aa9.71□□□□□ -0.85
RFFL-204ENST00000414419 A0A1W2PRQ8 180 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 A6NIZ1 184 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 NPIPB13A6NJU9 1138 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 NPIPB4C9JG80 1138 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 hCG_2039718K7EN88 272 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 MGRN1O60291 552 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 PRSS23O95084 383 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 LY6G6DO95868 133 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 FAM107AO95990 144 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 PTHP01270 115 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 HEXAP06865 529 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ERCC1P07992 297 aaPredicted RBP9.71□□□□□ -0.86
RFFL-204ENST00000414419 PATE4P0C8F1 98 aa9.71□□□□□ -0.86
RFFL-204ENST00000414419 ZNF14P17017 642 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms