RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 VN1R2Q8NFZ6 395 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 OR1N2Q8NGR9 330 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 ACER1Q8TDN7 264 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 CAPSLQ8WWF8 208 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 FRAT1Q92837 279 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 TMEM54Q969K7 222 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 ECHDC3Q96DC8 303 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 OR11A1Q9GZK7 315 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 CCL28Q9NRJ3 127 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 ING4Q9UNL4 249 aa3.38□□□□□ -1.87
HMGB3P31-201ENST00000413333 ZNF726A6NNF4 738 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 AKR7A2O43488 359 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 FAM189A1O60320 539 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 NPIPB7O75200 414 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 SERPINA5P05154 406 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 CALM1P0DP23 149 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 CALM2P0DP24 149 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 CALM3P0DP25 149 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 CCNB1P14635 433 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 ZNF250P15622 560 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 BCKDHBP21953 392 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 STOMP27105 288 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 CSNK1EP49674 416 aaKnown RBP3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 GPNMBQ14956 572 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 CCDC14Q49A88 953 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 TTC19Q6DKK2 380 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 CERS6Q6ZMG9 384 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 IL34Q6ZMJ4 242 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 IQCKQ8N0W5 287 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 OR4F15Q8NGB8 312 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 LINC01006Q8NI28 216 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 NRIP2Q9BQI9 281 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 DEFB127Q9H1M4 99 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 NEUROG2Q9H2A3 272 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 KCNJ16Q9NPI9 418 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 GPATCH2LQ9NWQ4 482 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 HRASLS2Q9NWW9 162 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 GNPTGQ9UJJ9 305 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 GOLT1BQ9Y3E0 138 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 HEBP2Q9Y5Z4 205 aa3.37□□□□□ -1.87
HMGB3P31-201ENST00000413333 ZNF646O15015 1829 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 TRAV25A0A0B4J276 109 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 A0A0G2JN53 185 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 ZNF816-ZNF321PA0A0X1KG74 233 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 A0A1B0GTQ1 180 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 A0A1B0GVI7 797 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 CLPXO76031 633 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 MOSP00540 346 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 ACSM4P0C7M7 580 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 POLR2MP0CAP2 368 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 SERPINB5P36952 375 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 SLC26A3P40879 764 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 SLC1A2P43004 574 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 NAMPTP43490 491 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 SH3BGRP55822 239 aaPredicted RBP3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 NUP107P57740 925 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 EIF3EP60228 445 aaKnown RBP3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 ADARB1P78563 741 aaKnown RBP3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 TWF1Q12792 350 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 HADHQ16836 314 aaKnown RBP3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 PIP5KL1Q5T9C9 394 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 OTPQ5XKR4 325 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 TMEM135Q86UB9 458 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 MICU2Q8IYU8 434 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 OR2G3Q8NGZ4 309 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 LYPD6BQ8NI32 183 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 GEMIN6Q8WXD5 167 aaKnown RBP3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 C8orf44Q96CB5 159 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 PHYHIPLQ96FC7 376 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 IMMP1LQ96LU5 166 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 OSBPL10Q9BXB5 764 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 UGT1A7Q9HAW7 530 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 UGT1A8Q9HAW9 530 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 BEX1Q9HBH7 125 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 RETNQ9HD89 108 aa3.36□□□□□ -1.87
HMGB3P31-201ENST00000413333 AGRNO00468 2067 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 GLYATL1P3A0A0U1RQE8 302 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 CIB4A0PJX0 185 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 H3BNH8 94 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 NDUFAB1O14561 156 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 MRPS12O15235 138 aaKnown RBP3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 CHST1O43916 411 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 CCNB2O95067 398 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 FOLR1P15328 257 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 ZNF19P17023 458 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 CNR1P21554 472 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 AQP2P41181 271 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 CCR8P51685 355 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 FGF8P55075 233 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 NUTF2P61970 127 aaKnown RBP3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 UNC119Q13432 240 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 DOC2AQ14183 400 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 ZNF79Q15937 498 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 IL17AQ16552 155 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 KCTD19Q17RG1 926 aaPredicted RBP3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 RFX4Q33E94 735 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 VAX1Q5SQQ9 334 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 TTC23LQ6PF05 361 aa3.35□□□□□ -1.87
HMGB3P31-201ENST00000413333 ANGPTL8Q6UXH0 198 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms