RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TSSK2Q96PF2 358 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 PBX4Q9BYU1 374 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 CHST6Q9GZX3 395 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 PLCL2Q9UPR0 1127 aa16■□□□□ 0.15
SDCBP-202ENST00000413219 ELOA3DA6NLF2 546 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-202ENST00000413219 BLOC1S5-TXNDC5H3BN57 136 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 TEX46H3BTG2 121 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 KDM4BO94953 1096 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 OR4E1P0C645 316 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 MST1P26927 711 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 CTXN1P60606 82 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 FLI1Q01543 452 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ELOA3BQ3SY89 546 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ALG10Q5BKT4 473 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 LPCAT3Q6P1A2 487 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 CSNK1A1LQ8N752 337 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ELOA3Q8NG57 546 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 OR10AC1Q8NH08 325 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ASB12Q8WXK4 309 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 C4orf45Q96LM5 186 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 POFUT1Q9H488 388 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 BARX1Q9HBU1 254 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ZNF346Q9UL40 294 aaKnown RBP15.99■□□□□ 0.15
SDCBP-202ENST00000413219 TRBV23OR9-2A0A075B6M9 112 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 A0A1B0GTH9 108 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 TMEM82A0PJX8 343 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 C4orf47A7E2U8 309 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 SLC31A1O15431 190 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 OR2F2O95006 317 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 PRKACAP17612 351 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ACTR1BP42025 376 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ACTR1AP61163 376 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 OR2F1Q13607 317 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 YOD1Q5VVQ6 348 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-202ENST00000413219 WBP2NLQ6ICG8 309 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 FAM166AQ6J272 317 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ENPP7Q6UWV6 458 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-202ENST00000413219 PRSS35Q8N3Z0 413 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 FAM3DQ96BQ1 224 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 PHYHIPLQ96FC7 376 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 SCPEP1Q9HB40 452 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 IL23AQ9NPF7 189 aa15.99■□□□□ 0.15
SDCBP-202ENST00000413219 GPN3Q9UHW5 284 aaPredicted RBP15.99■□□□□ 0.15
SDCBP-202ENST00000413219 A0A1B0GTI1 187 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 SLC25A4P12235 298 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 NFATC4Q14934 902 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 C2orf76Q3KRA6 126 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 GLT8D1Q68CQ7 371 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 BIVMQ86UB2 503 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 BEST3Q8N1M1 668 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 C12orf76Q8N812 135 aaPredicted RBP15.98■□□□□ 0.15
SDCBP-202ENST00000413219 RELL2Q8NC24 303 aaPredicted RBP15.98■□□□□ 0.15
SDCBP-202ENST00000413219 LRRC46Q96FV0 321 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 NPAS1Q99742 590 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 SLCO5A1Q9H2Y9 848 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 SRA1Q9HD15 236 aaKnown RBP15.98■□□□□ 0.15
SDCBP-202ENST00000413219 LRIT1Q9P2V4 623 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 ZNF107Q9UII5 783 aaPredicted RBP15.98■□□□□ 0.15
SDCBP-202ENST00000413219 PRELID3BQ9Y3B1 194 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 C2orf74A8MZ97 194 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 FCARP24071 287 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 KIR3DL2P43630 455 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 GPR18Q14330 331 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 DEFB115Q30KQ5 88 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 TMEM205Q6UW68 189 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 ATG4DQ86TL0 474 aaPredicted RBP15.98■□□□□ 0.15
SDCBP-202ENST00000413219 CCDC36Q8IYA8 594 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 LINC00518Q8N0U6 118 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 OR51A4Q8NGJ6 313 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 OR5M8Q8NGP6 311 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 OR6N2Q8NGY6 317 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 MARC2Q969Z3 335 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 SPACA7Q96KW9 195 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 WDR92Q96MX6 357 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 MMP25Q9NPA2 562 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 GRHPRQ9UBQ7 328 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 EPHA6Q9UF33 1036 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 ERVK-19Q9WJR5 959 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 DTX4Q9Y2E6 619 aa15.98■□□□□ 0.15
SDCBP-202ENST00000413219 TBC1D3DA0A087WVF3 549 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 A0A0J9YY10 115 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 KANTRA0A1W2PQU2 76 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 POM121BA6NF01 834 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 TBC1D3LB9A6J9 549 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 DCTN6O00399 190 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 RDH16O75452 317 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 AKR7A3O95154 331 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 RASGRP1O95267 797 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 RAB3DO95716 219 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 RENP00797 406 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 FCER2P06734 321 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 ITGA5P08648 1049 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 ASAH2BP0C7U1 165 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 TBC1D3HP0C7X1 549 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 PVRP15151 417 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 LSSP48449 732 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 STARP49675 285 aa15.97■□□□□ 0.15
SDCBP-202ENST00000413219 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.97■□□□□ 0.15
SDCBP-202ENST00000413219 PABPC1L2AQ5JQF8 200 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms