RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 FMODQ06828 376 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 DOC2BQ14184 412 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 C3AR1Q16581 482 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 SYT6Q5T7P8 510 aaPredicted RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 RPUSD3Q6P087 351 aaKnown RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 DNM1P34Q6PK57 102 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 LYPD4Q6UWN0 246 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 CREB3L2Q70SY1 520 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 FCRLAQ7L513 359 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 RFLNBQ8N5W9 214 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 NANOGP1Q8N7R0 232 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 OR6X1Q8NH79 312 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 RNF128Q8TEB7 428 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 SLC25A44Q96H78 314 aaPredicted RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 CRELD1Q96HD1 420 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 ADAD1Q96M93 576 aaKnown RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 ZNF385AQ96PM9 386 aaKnown RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 OR5M11Q96RB7 305 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 ZNF649Q9BS31 505 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 EMC6Q9BV81 110 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 MRPL13Q9BYD1 178 aaKnown RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 FAM192AQ9GZU8 254 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 PRDM14Q9GZV8 571 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 EXO5Q9H790 373 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 MARCH7Q9H992 704 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 SRA1Q9HD15 236 aaKnown RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 INPP5EQ9NRR6 644 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 ERVK13-1Q9NX77 482 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 PAQR5Q9NXK6 330 aaPredicted RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 CLEC2DQ9UHP7 191 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 ERGIC3Q9Y282 383 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 B3GNT3Q9Y2A9 372 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 NCOR2Q9Y618 2525 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 MED12Q93074 2177 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ACACAQ13085 2346 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 IGKV3D-15A0A087WSY6 115 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 IGKV1D-43A0A0B4J1Z2 117 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 A0A1W2PQL4 384 aaPredicted RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 MED19A0JLT2 244 aaPredicted RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 TVP23AA6NH52 213 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CENPBD1B2RD01 187 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 AQP7O14520 342 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 AKAP8O43823 692 aaKnown RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 ZNF432O94892 652 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 SYNGR4O95473 234 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 GPANK1O95872 356 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 GAAP10253 952 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 PSKH1P11801 424 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 NR2C1P13056 603 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CPN1P15169 458 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CRABP1P29762 137 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 TGFBR2P37173 567 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CENPAP49450 140 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 WNT4P56705 351 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CLRN1P58418 232 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ZNF85Q03923 595 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 GLO1Q04760 184 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CAMK2DQ13557 499 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 MED22Q15528 200 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 HIST3H3Q16695 136 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 TIGD6Q17RP2 521 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 OR2G6Q5TZ20 316 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CARD17Q5XLA6 110 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 SLC16A9Q7RTY1 509 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 LHFPL3Q86UP9 236 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ERI1Q8IV48 349 aaKnown RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 SLC35F2Q8IXU6 374 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 TIGD4Q8IY51 512 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 TMEM123Q8N131 208 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 KLHL36Q8N4N3 616 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ACBD7Q8N6N7 88 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ZIC4Q8N9L1 334 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ZNF511Q8NB15 262 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 SYT14Q8NB59 555 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ZNF485Q8NCK3 441 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 OR10H4Q8NGA5 316 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 OR52N1Q8NH53 320 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 FNDC8Q8TC99 324 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ABHD3Q8WU67 409 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 SMAP2Q8WU79 429 aaPredicted RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 ROBO4Q8WZ75 1007 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 NMD3Q96D46 503 aaKnown RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 WDYHV1Q96HA8 205 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 COG8Q96MW5 612 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 OPALINQ96PE5 141 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 OR2M2Q96R28 347 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 TBX5Q99593 518 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 TIMP4Q99727 224 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ALG8Q9BVK2 526 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 RERGLQ9H628 205 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CHCHD3Q9NX63 227 aaKnown RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 NDUFA13Q9P0J0 144 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 ING1Q9UK53 422 aaPredicted RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 MCTS1Q9ULC4 181 aaKnown RBP5.91□□□□□ -1.46
VPS41-204ENST00000413141 COPS3Q9UNS2 423 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 B9D1Q9UPM9 204 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 RCE1Q9Y256 329 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 FLVCR1Q9Y5Y0 555 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 CEPT1Q9Y6K0 416 aa5.91□□□□□ -1.46
VPS41-204ENST00000413141 FREM3P0C091 2139 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms