RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 PPIL3Q9H2H8 161 aaKnown RBP12.24□□□□□ -0.45
LIMS1-205ENST00000410093 ALKBH4Q9NXW9 302 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 KLRF1Q9NZS2 232 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 PAIP2BQ9ULR5 123 aaKnown RBP12.24□□□□□ -0.45
LIMS1-205ENST00000410093 ETV7Q9Y603 341 aa12.24□□□□□ -0.45
LIMS1-205ENST00000410093 A0A087WZY1 265 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 IGHV3-20A0A0C4DH32 117 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 TRBV5-5A0A0J9YX44 114 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 A0A1W2PNV4 684 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 SMIM30A4D0T7 59 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 TMEM200CA6NKL6 621 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 CENPXA8MT69 81 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 AIPO00170 330 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF254O75437 659 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 CALCBP10092 127 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 AHCYP23526 432 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 MMP15P51511 669 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 TEX30Q5JUR7 227 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 UBE2NLQ5JXB2 153 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 BICRALQ6AI39 1079 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 PIP4P1Q86T03 277 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 NAXDQ8IW45 347 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 PM20D2Q8IYS1 436 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 RFLNBQ8N5W9 214 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 BMPERQ8N8U9 685 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 OR6N2Q8NGY6 317 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF417Q8TAU3 575 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 M1APQ8TC57 530 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 RFT1Q96AA3 541 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF524Q96C55 264 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 DERL3Q96Q80 235 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF700Q9H0M5 742 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 PTGES2Q9H7Z7 377 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 RNF121Q9H920 327 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 CHST11Q9NPF2 352 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 MRM2Q9UI43 246 aaKnown RBP12.23□□□□□ -0.45
LIMS1-205ENST00000410093 CAMK2AQ9UQM7 478 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 WIF1Q9Y5W5 379 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 B3GALT1Q9Y5Z6 326 aa12.23□□□□□ -0.45
LIMS1-205ENST00000410093 ASCC3Q8N3C0 2202 aaKnown RBP12.23□□□□□ -0.45
LIMS1-205ENST00000410093 A0A1W2PQ72 361 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 SLC22A23A1A5C7 686 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 HMX3A6NHT5 357 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 TTLL8A6PVC2 850 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 PLA2G10O15496 165 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 LYRM1O43325 122 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 SULT1B1O43704 296 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 ZFPL1O95159 310 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 HRGP04196 525 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 RAB40ALP0C0E4 278 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 CD59P13987 128 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 CFPP27918 469 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 HLA-DMAP28067 261 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 TPTEP56180 551 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 P2RY14Q15391 338 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 TRIP6Q15654 476 aaKnown RBP12.22□□□□□ -0.45
LIMS1-205ENST00000410093 CEP78Q5JTW2 689 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 POMZP3Q6PJE2 187 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 DEGS2Q6QHC5 323 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 OPN5Q6U736 354 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 LYPD8Q6UX82 237 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF679Q8IYX0 411 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 GPR148Q8TDV2 347 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 SMAP2Q8WU79 429 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-205ENST00000410093 RAB40AQ8WXH6 277 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 NSMAFQ92636 917 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 SPACA9Q96E40 222 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-205ENST00000410093 MAP6Q96JE9 813 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 OR14A2Q96R54 314 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 OR8B4Q96RC9 309 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF587Q96SQ5 575 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-205ENST00000410093 ZPBPQ9BS86 351 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 WACQ9BTA9 647 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 METTL7AQ9H8H3 244 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 TCF7L1Q9HCS4 588 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF275Q9NSD4 429 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-205ENST00000410093 OCIAD1Q9NX40 245 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 COPZ2Q9P299 210 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 V9GY05 133 aa12.22□□□□□ -0.45
LIMS1-205ENST00000410093 IGLV1-36A0A0B4J1U3 117 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 SPAARA0A1B0GVQ0 90 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 FAM240BA0A1B0GVZ2 78 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 MEIOCA2RUB1 952 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 B4DXG7 233 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 NPIPA5E9PKD4 350 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 C11orf98E9PRG8 122 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 GPR171O14626 319 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 GSTZ1O43708 216 aaPredicted RBP12.21□□□□□ -0.45
LIMS1-205ENST00000410093 ORC5O43913 435 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 AQP8O94778 261 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 ACP1P24666 158 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 MRPS10P82664 201 aaKnown RBP12.21□□□□□ -0.45
LIMS1-205ENST00000410093 SELENBP1Q13228 472 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 ZNF239Q16600 458 aaKnown RBP12.21□□□□□ -0.45
LIMS1-205ENST00000410093 FAM27D1Q5T7N8 215 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 C1QL3Q5VWW1 255 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 DPY19L4Q7Z388 723 aa12.21□□□□□ -0.45
LIMS1-205ENST00000410093 OR4M1Q8NGD0 313 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms