RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 MRPL19P49406 292 aaKnown RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 RAP2BP61225 183 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 SLC10A2Q12908 348 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 MFAP5Q13361 173 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 RBM39Q14498 530 aaKnown RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 C11orf91Q3C1V1 193 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 C1orf220Q5T0J3 134 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF679Q8IYX0 411 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 LMNTD1Q8N9Z9 388 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 MAL2Q969L2 176 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 SNX18Q96RF0 628 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 NIPSNAP3BQ9BS92 247 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 URM1Q9BTM9 101 aaKnown RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 MRI1Q9BV20 369 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 FOXD3Q9UJU5 478 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 MRPS18BQ9Y676 258 aaKnown RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 GON4LQ3T8J9 2241 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 IGHV5-51A0A0C4DH38 117 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 LOC285095A0A1B0GVY8 99 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 TCRBV7S2A1N4TA0A589 114 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 F5H5K5 113 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 SUSD5O60279 629 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 CH25HO95992 272 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 CD1DP15813 335 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 S1PR1P21453 382 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 DLX5P56178 289 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 KCNJ11Q14654 390 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 SOHLH1Q5JUK2 328 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 WBP2NLQ6ICG8 309 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 OR7E24Q6IFN5 339 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 TRMT10BQ6PF06 316 aaKnown RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 CLEC14AQ86T13 490 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 NAA40Q86UY6 237 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 ARL6IP6Q8N6S5 226 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 OR4F15Q8NGB8 312 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 OR52N5Q8NH56 324 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 FCRL1Q96LA6 429 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 LMF1Q96S06 567 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 JMJD8Q96S16 334 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 MS4A7Q9GZW8 240 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 BCO1Q9HAY6 547 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 IL20RAQ9UHF4 553 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 SH2D7A6NKC9 451 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 DEDDO75618 318 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 PTH2RP49190 550 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 CX3CR1P49238 355 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 INSM1Q01101 510 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 SEMA3BQ13214 749 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 INPP5JQ15735 1006 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 PPP1R3AQ16821 1122 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 FAM162BQ5T6X4 162 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 NANOGP8Q6NSW7 305 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 RANBP10Q6VN20 620 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 BLNKQ8WV28 456 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF251Q9BRH9 671 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 SUCNR1Q9BXA5 334 aa6.7□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF701Q9NV72 531 aaPredicted RBP6.7□□□□□ -1.34
SCN9A-202ENST00000409435 MYO7AQ13402 2215 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 K7ERU9 68 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 AMY2AP04746 511 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 IGFBP6P24592 240 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SSTR2P30874 369 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 POU3F4P49335 361 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 MTPNP58546 118 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 RPP30P78346 268 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 RDH10Q8IZV5 341 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SUMF1Q8NBK3 374 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 TSLPQ969D9 159 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 UHRF2Q96PU4 802 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SLC25A31Q9H0C2 315 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 MMP28Q9H239 520 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SLC2A8Q9NY64 477 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 PCDHGA9Q9Y5G4 932 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 KPTNQ9Y664 436 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 DENRO43583 198 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 GJB3O75712 270 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 LY86O95711 162 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ABHD16AO95870 558 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 IGHV3-9P01782 118 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 CELA2BP08218 269 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 CSF1P09603 554 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 TBXA2RP21731 343 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ADRA1AP35348 466 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 GGTLC2Q14390 218 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SPINK14Q6IE38 97 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 RGS7BPQ6MZT1 257 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ASRGL1Q7L266 308 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 GID4Q8IVV7 300 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 OR5M1Q8NGP8 315 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 GPR150Q8NGU9 434 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 RHEBL1Q8TAI7 183 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 SLC7A13Q8TCU3 470 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 OSTF1Q92882 214 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ZNF582Q96NG8 517 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 NIPAL2Q9H841 368 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 LANCL2Q9NS86 450 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 FAM212BQ9NTI7 297 aaPredicted RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 GAR1Q9NY12 217 aaKnown RBP6.69□□□□□ -1.34
SCN9A-202ENST00000409435 B3GAT1Q9P2W7 334 aa6.69□□□□□ -1.34
SCN9A-202ENST00000409435 ADAM29Q9UKF5 820 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms