RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 M0QZ24 198 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 ITM2AO43736 263 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 UBOX5O94941 541 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 IGHV3-13P01766 116 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 BGLAPP02818 100 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 IL12AP29459 219 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 MTNR1AP48039 350 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 MVDP53602 400 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 DSTNP60981 165 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 PUDPQ08623 228 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 FAM209AQ5JX71 171 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 TMEM53Q6P2H8 277 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 SLC41A3Q96GZ6 507 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 DCLRE1CQ96SD1 692 aaKnown RBP14.09□□□□□ -0.15
CHMP3-203ENST00000409225 RHOXF2Q9BQY4 288 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 NPHS2Q9NP85 383 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 TCF7L2Q9NQB0 619 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 SLC6A13Q9NSD5 602 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 IFT52Q9Y366 437 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 INSIG2Q9Y5U4 225 aa14.09□□□□□ -0.15
CHMP3-203ENST00000409225 A0A0G2JPF8 293 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 MDFIC2A0A1B0GVS7 189 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 HNRNPCL2B2RXH8 293 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 HNRNPCL3B7ZW38 293 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 HNRNPCL1O60812 293 aaKnown RBP14.08□□□□□ -0.16
CHMP3-203ENST00000409225 SNAP29O95721 258 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 BPGMP07738 259 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 SBK2P0C263 348 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 HNRNPCL4P0DMR1 293 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 IGHV4-38-2P0DP08 117 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 LBPP18428 481 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 AHCYP23526 432 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 HTR2AP28223 471 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 RBMXP38159 391 aaKnown RBP14.08□□□□□ -0.16
CHMP3-203ENST00000409225 BIDP55957 195 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 SEC61A1P61619 476 aaKnown RBP14.08□□□□□ -0.16
CHMP3-203ENST00000409225 ALG10BQ5I7T1 473 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 SPATA46Q5T0L3 261 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 WDR88Q6ZMY6 472 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 C10orf53Q8N6V4 93 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 SCAIQ8N9R8 606 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 OR52E2Q8NGJ4 325 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 OR1J2Q8NGS2 313 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 OR1J1Q8NGS3 322 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 UBE2FQ969M7 185 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 MOGAT1Q96PD6 335 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 EGLN1Q9GZT9 426 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 LRMDAQ9H2I8 198 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 C1orf198Q9H425 327 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 BEX1Q9HBH7 125 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 DCAF16Q9NXF7 216 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 EGFL7Q9UHF1 273 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 NPTNQ9Y639 398 aa14.08□□□□□ -0.16
CHMP3-203ENST00000409225 A0A1B0GUS0 222 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 TMEM247A6NEH6 219 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 LRRN3E7EW58 273 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 C11orf98E9PRG8 122 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 RFXANKO14593 260 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 TM9SF1O15321 606 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 ENTPD5O75356 428 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 MFN2O95140 757 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 FARS2O95363 451 aaKnown RBP14.07□□□□□ -0.16
CHMP3-203ENST00000409225 MYZAPP0CAP1 466 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 MPV17P39210 176 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 RAG2P55895 527 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 SPRNQ5BIV9 151 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 RHOUQ7L0Q8 258 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 PARP8Q8N3A8 854 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 CPEB3Q8NE35 698 aaKnown RBP14.07□□□□□ -0.16
CHMP3-203ENST00000409225 OR4K5Q8NGD3 323 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 GEMIN6Q8WXD5 167 aaKnown RBP14.07□□□□□ -0.16
CHMP3-203ENST00000409225 TMEM54Q969K7 222 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 CITED1Q99966 193 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 TNFRSF19Q9NS68 423 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 TMEM38BQ9NVV0 291 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 GLTPQ9NZD2 209 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 POLR3KQ9Y2Y1 108 aaPredicted RBP14.07□□□□□ -0.16
CHMP3-203ENST00000409225 GPR45Q9Y5Y3 372 aa14.07□□□□□ -0.16
CHMP3-203ENST00000409225 IQCMA0A1B0GVH7 501 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 PLSCR5A0PG75 271 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 FAM181BA6NEQ2 426 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 ZSCAN5BA6NJL1 495 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 PLPP3O14495 311 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 TIMM23O14925 209 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 HOXA3O43365 443 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-203ENST00000409225 ALX3O95076 343 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 PTHP01270 115 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 IGHV2-70P01814 119 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 ALDOCP09972 364 aaKnown RBP14.06□□□□□ -0.16
CHMP3-203ENST00000409225 CCNOP22674 350 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 MMP15P51511 669 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 PLP2Q04941 152 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 LRRC74AQ0VAA2 488 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 PDCD4Q53EL6 469 aaKnown RBP14.06□□□□□ -0.16
CHMP3-203ENST00000409225 TMEM255AQ5JRV8 349 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 OLFML2AQ68BL7 652 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 SLC16A14Q7RTX9 510 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 PXKQ7Z7A4 578 aa14.06□□□□□ -0.16
CHMP3-203ENST00000409225 BHLHE22Q8NFJ8 381 aaPredicted RBP14.06□□□□□ -0.16
CHMP3-203ENST00000409225 OR6S1Q8NH40 331 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms