RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RAB10P61026 200 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 TSPAN5P62079 268 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 MRPS22P82650 360 aaKnown RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ILKQ13418 452 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 WDR43Q15061 677 aaKnown RBP eCLIP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 KLHL40Q2TBA0 621 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 THEM4Q5T1C6 240 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 PAMR1Q6UXH9 720 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ARCQ7LC44 396 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ASCL5Q7RTU5 278 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 NELFCDQ8IXH7 590 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 KLHL30-AS1Q8NEE0 82 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 GLYATL2Q8WU03 294 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 PDCD6IPQ8WUM4 868 aaKnown RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 SIGLEC12Q96PQ1 595 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 OR8B4Q96RC9 309 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ZNF184Q99676 751 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 KIR2DL4Q99706 377 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ANKRD60Q9BZ19 345 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 C20orf85Q9H1P6 137 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 OR51M1Q9H341 326 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 Q9H3A6 140 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 ZNF702PQ9H963 129 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 C20orf96Q9NUD7 363 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 GPATCH2LQ9NWQ4 482 aa3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 PAIP2BQ9ULR5 123 aaKnown RBP3.66□□□□□ -1.82
HMGB1P13-201ENST00000406019 FHAD1B1AJZ9 1412 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 IGLV3-22A0A075B6J6 115 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 H3BQV1 296 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 CCL21O00585 134 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 RAB29O14966 203 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 SCAMP2O15127 329 aaKnown RBP3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 EIF3HO15372 352 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 CIAO1O76071 339 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 SEMA3DO95025 777 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 IGHV3-48P01763 117 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 IGHV3-23P01764 117 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 C2P06681 752 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 CRYGCP07315 174 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 BTDP43251 543 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 TFPI2P48307 235 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 GPM6AP51674 278 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 PAX5Q02548 391 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 BCL2L1Q07817 233 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 HSDL1Q3SXM5 330 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 PAGE2BQ5JRK9 111 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 CERS6Q6ZMG9 384 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 SCARA5Q6ZMJ2 495 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 SLC51BQ86UW2 128 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 STX12Q86Y82 276 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 ITPRIPQ8IWB1 547 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 LYG1Q8N1E2 194 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 C6orf223Q8N319 242 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 CCDC71LQ8N9Z2 235 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 ENKURQ8TC29 256 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 MARCH1Q8TCQ1 289 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 OR1E3Q8WZA6 343 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 SLC25A38Q96DW6 304 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 TMA16Q96EY4 203 aaKnown RBP3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 ITCHQ96J02 903 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 CYTH2Q99418 400 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 ATP5SQ99766 215 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 SELENOSQ9BQE4 189 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 POTEKPQ9BYX7 375 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 UBXN6Q9BZV1 441 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 ELOVL6Q9H5J4 265 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 CYP3A43Q9HB55 503 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 LYARQ9NX58 379 aaKnown RBP3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 EURLQ9NYK6 297 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 TAS2R7Q9NYW3 318 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 KIF25Q9UIL4 384 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 KLHL21Q9UJP4 597 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 LRRC42Q9Y546 428 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 CSAG2Q9Y5P2 127 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 V9GY05 133 aa3.65□□□□□ -1.83
HMGB1P13-201ENST00000406019 GOSR2O14653 212 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 KLK3P07288 261 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 SNRPAP09012 282 aaKnown RBP3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 GSTM3P21266 225 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 STOMP27105 288 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 NTSP30990 170 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 RRM2P31350 389 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 NAA10P41227 235 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 GPR4P46093 362 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 KLK7P49862 253 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 MEOX2P50222 304 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF763Q0D2J5 394 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 ITIH4Q14624 930 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 ALX1Q15699 326 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 ZNF829Q3KNS6 432 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 HIGD2BQ4VC39 106 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 PRR30Q53SZ7 412 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 VAX1Q5SQQ9 334 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 SAPCD1Q5SSQ6 148 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 AGBL2Q5U5Z8 902 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 C9orf135Q5VTT2 229 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 C1orf94Q6P1W5 598 aa3.64□□□□□ -1.83
HMGB1P13-201ENST00000406019 TRIM40Q6P9F5 258 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms