RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ACTR1BP42025 376 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 GNPDA1P46926 289 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 DHPSP49366 369 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 C21orf59P57076 290 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ACTR1AP61163 376 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 HERVK_113P63132 956 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZFP36L1Q07352 338 aaKnown RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR4D1Q15615 310 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 TCTEX1D4Q5JR98 221 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 C1orf189Q5VU69 101 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 RAB12Q6IQ22 244 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 FRA10AC1Q70Z53 315 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 C10orf107Q8IVU9 208 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 TBC1D21Q8IYX1 336 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 LINC00518Q8N0U6 118 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 CHCHD4Q8N4Q1 142 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SAMD12Q8N8I0 201 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ARL10Q8N8L6 244 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR9A1PQ8NGU1 263 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 OR5K2Q8NHB8 316 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 NAT14Q8WUY8 206 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 DYDC1Q8WWB3 177 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF75CPQ92670 426 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 CNDP1Q96KN2 507 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM237Q96Q45 408 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 RAB11FIP5Q9BXF6 653 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ERVK-6Q9BXR3 956 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 KIR3DX1Q9H7L2 352 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SP140LQ9H930 580 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SPATA7Q9P0W8 599 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SPASTQ9UBP0 616 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 EIF3KQ9UBQ5 218 aaKnown RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 APOBEC3BQ9UH17 382 aaKnown RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 MOSPD1Q9UJG1 213 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 PTBP2Q9UKA9 531 aaKnown RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 PDE10AQ9Y233 779 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 ASF1AQ9Y294 204 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 STK38LQ9Y2H1 464 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLCO1B1Q9Y6L6 691 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 FAM186AA6NE01 2351 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 GPR179Q6PRD1 2367 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 MUC6Q6W4X9 2439 aa3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 RIF1Q5UIP0 2472 aaKnown RBP3.92□□□□□ -1.78
HMGB3P19-201ENST00000403971 WDFY4Q6ZS81 3184 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 VPS13AQ96RL7 3174 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 TRBV2A0A0J9YWF9 115 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 A0A0U1RRA0 63 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 A0A1B0GTQ1 180 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 TMEM89A2RUT3 159 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC9B1P1A6NJY1 282 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 PDZK1P1A8MUH7 402 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SUPT3HB4E1H0 165 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 K7EPI3 171 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 POLR3GO15318 223 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 TAPBPO15533 448 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 PHF1O43189 567 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 GALR3O60755 368 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 EDF1O60869 148 aaKnown RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SNNO75324 88 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SUPT3HO75486 399 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 STK16O75716 305 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SYNGR4O95473 234 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 FCER2P06734 321 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 FGF4P08620 206 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 NEFHP12036 1026 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 BGNP21810 368 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 LAMA1P25391 3075 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 AK4P27144 223 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 IMPA1P29218 277 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 PBLDP30039 288 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 ALDH3B1P43353 468 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 ARRB1P49407 418 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 CSNK1EP49674 416 aaKnown RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 CCL11P51671 97 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 BST1Q10588 318 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SRSF5Q13243 272 aaKnown RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 STX3Q13277 289 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 CYLC2Q14093 348 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 GRB7Q14451 532 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 CHI3L2Q15782 390 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 TCHHL1Q5QJ38 904 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF678Q5SXM1 525 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 AGTRAPQ6RW13 159 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 LRRC70Q7Z2Q7 622 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 TAF8Q7Z7C8 310 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SLC22A16Q86VW1 577 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 C17orf82Q86X59 251 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 GKN2Q86XP6 184 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 DEFB119Q8N690 84 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 POM121L12Q8N7R1 296 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF491Q8N8L2 437 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SETD7Q8WTS6 366 aaKnown RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SKA2Q8WVK7 121 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 CHMP6Q96FZ7 201 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 C12orf66Q96MD2 445 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF317Q96PQ6 595 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 ZNF382Q96SR6 550 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SCN2AQ99250 2005 aa3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 PAIP2Q9BPZ3 127 aaKnown RBP3.91□□□□□ -1.78
HMGB3P19-201ENST00000403971 SIKE1Q9BRV8 207 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms