RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ANKRD19PQ9H560 264 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 CXorf36Q9H7Y0 433 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 MRPS28Q9Y2Q9 187 aaKnown RBP13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 TCRBV5S1A1TA0A578 114 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC34A2O95436 690 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 NHSL2Q5HYW2 709 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SLCO4C1Q6ZQN7 724 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 PM20D2Q8IYS1 436 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 ST7LQ8TDW4 575 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 NOX4Q9NPH5 578 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 KCNJ16Q9NPI9 418 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 INPP5EQ9NRR6 644 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 FBXO24O75426 580 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 TPT1P13693 172 aaKnown RBP13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 ZNF92Q03936 586 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SLC10A1Q14973 349 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 HES3Q5TGS1 186 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 RTL6Q6ICC9 239 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 KDM8Q8N371 416 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 DNAJC5GQ8N7S2 189 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 CHTF18Q8WVB6 975 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 LYSMD1Q96S90 227 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 GLIPR2Q9H4G4 154 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 PRDM6Q9NQX0 595 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 EPOPA6NHQ4 379 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 HSD17B6O14756 317 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 FURINP09958 794 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SNCAP37840 140 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 LIM2P55344 173 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 RNLSQ5VYX0 342 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 NUDT8Q8WV74 236 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 RAB3CQ96E17 227 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 TEX101Q9BY14 249 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 C19orf12Q9NSK7 152 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 UFSP2Q9NUQ7 469 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 OR51B4Q9Y5P0 310 aa13.09□□□□□ -0.31
PCDHA11-201ENST00000398640 SDK1Q7Z5N4 2213 aa13.08□□□□□ -0.31
PCDHA11-201ENST00000398640 EIF1BO60739 113 aaKnown RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 PRKACBP22694 351 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 EPHA8P29322 1005 aaPredicted RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 BLVRBP30043 206 aaPredicted RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 TAS2R46P59540 309 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 GPR176Q14439 515 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 GUSBP11Q6P575 273 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 RPL22L1Q6P5R6 122 aaKnown RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF836Q6ZNA1 936 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 WDR5BQ86VZ2 330 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 RDH10Q8IZV5 341 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 MUL1Q969V5 352 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 TMEM59Q9BXS4 323 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 MS4A8Q9BY19 250 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 MYOTQ9UBF9 498 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 FUOMA2VDF0 154 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 CDHR4A6H8M9 788 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 EIF1P41567 113 aaKnown RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 NKX6-1P78426 367 aaPredicted RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 LSAMPQ13449 338 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 DUSP7Q16829 419 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 CYP4V2Q6ZWL3 525 aaPredicted RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 GDPD3Q7L5L3 318 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 EXD3Q8N9H8 876 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 TFAP2CQ92754 450 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 ATG4BQ9Y4P1 393 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 PCDHGA5Q9Y5G8 931 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 RNF212BA8MTL3 300 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 K7EQS6 105 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 SSTP61278 116 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF169Q14929 603 aaPredicted RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 MBOAT2Q6ZWT7 520 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 ZDHHC16Q969W1 377 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 FBXO7Q9Y3I1 522 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 H0YIV9 168 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 CTNSO60931 367 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 OLFM2O95897 454 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 RPS25P62851 125 aaKnown RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 CATR1Q13166 79 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 CDONQ4KMG0 1287 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 OR7G1Q8NGA0 311 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 UPRTQ96BW1 309 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 RASD2Q96D21 266 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 CD300AQ9UGN4 299 aa13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 KLF13Q9Y2Y9 288 aaPredicted RBP13.08□□□□□ -0.32
PCDHA11-201ENST00000398640 A0A1W2PS29 197 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 GPR137BO60478 399 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 RPS2P15880 293 aaKnown RBP13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC19A1P41440 591 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF91Q05481 1191 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 BAXQ07812 192 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 ILKQ13418 452 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 BRICD5Q6PL45 260 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 HRASLS5Q96KN8 279 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 PDE4DIPQ5VU43 2346 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 A0A1B0GWA3 101 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 IL3RAP26951 378 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 OTUD1Q5VV17 481 aaPredicted RBP13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 DEFB108BQ8NET1 73 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 DSCR3O14972 297 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 CEACAM5P06731 702 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 DAPP51397 102 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 OR5M9Q8NGP3 310 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms