RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ACTL6AO96019 429 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM225BP0DP42 221 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 TNFSF4P23510 183 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 CFHR1Q03591 330 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 CNN3Q15417 329 aaKnown RBP7.47□□□□□ -1.21
PTPRD-204ENST00000397606 DCXRQ7Z4W1 244 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 CST11Q9H112 138 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 C20orf141Q9NUB4 165 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF223Q9UK11 482 aaPredicted RBP7.47□□□□□ -1.21
PTPRD-204ENST00000397606 LHX6Q9UPM6 363 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 TPRP12270 2363 aaKnown RBP7.47□□□□□ -1.21
PTPRD-204ENST00000397606 DHHO43323 396 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 SGCEO43556 437 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 TSPAN2O60636 221 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 FZD7O75084 574 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 CD96P40200 585 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 SOX8P57073 446 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 GNG2P59768 71 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 FAPQ12884 760 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ANKRD34AQ69YU3 496 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ATG4DQ86TL0 474 aaPredicted RBP7.47□□□□□ -1.21
PTPRD-204ENST00000397606 NEDD4LQ96PU5 975 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 CPNE5Q9HCH3 593 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 TRAPPC4Q9Y296 219 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 NOP16Q9Y3C1 178 aaKnown RBP7.47□□□□□ -1.21
PTPRD-204ENST00000397606 HRH3Q9Y5N1 445 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 PCM1Q15154 2024 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 PI4KAP42356 2102 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 IGLV3-12A0A075B6K2 115 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 LOC101059948A0A1B0GTJ6 334 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 DLGAP1O14490 977 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 BMP4P12644 408 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 HTR2AP28223 471 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 TGFBR2P37173 567 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 RAC3P60763 192 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 FHL5Q5TD97 284 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 PPP1R32Q7Z5V6 425 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 OR2M7Q8NG81 312 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 OR10D3Q8NH80 312 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 TIMM10BQ9Y5J6 103 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 IGKV3D-11A0A0A0MRZ8 115 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF878C9JN71 531 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF701M0R085 212 aaPredicted RBP7.47□□□□□ -1.21
PTPRD-204ENST00000397606 DOK2O60496 412 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 SELENOFO60613 162 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF254O75437 659 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 SLC2A10O95528 541 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 PLATP00750 562 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 IGKV3-11P04433 115 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 NCS1P62166 190 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ARL6IP1Q15041 203 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 RSU1Q15404 277 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.47□□□□□ -1.21
PTPRD-204ENST00000397606 SLC38A9Q8NBW4 561 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 OR2M3Q8NG83 312 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 ADIPOR1Q96A54 375 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 AICDAQ9GZX7 198 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 FAM186AA6NE01 2351 aa7.47□□□□□ -1.21
PTPRD-204ENST00000397606 TMEM129A0AVI4 362 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 DVL2O14641 736 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 TBX6O95947 436 aaPredicted RBP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 IGKV1D-16P01601 117 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 GUSBP08236 651 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 GABRA5P31644 462 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 ID4P47928 161 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 CLN3Q13286 438 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 TOMM34Q15785 309 aaPredicted RBP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 TBC1D28Q2M2D7 210 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 MRPL14Q6P1L8 145 aaKnown RBP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 BAIAP2L2Q6UXY1 529 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 BTN2A1Q7KYR7 527 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 OR5M9Q8NGP3 310 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 AKAP1Q92667 903 aaKnown RBP eCLIP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 FOXRED1Q96CU9 486 aaPredicted RBP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 ACTR6Q9GZN1 396 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 SLC6A15Q9H2J7 730 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 OR51B6Q9H340 312 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 FLRT3Q9NZU0 649 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 GMEB1Q9Y692 573 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 SCGNO76038 276 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 CELA2AP08217 269 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 UBCP0CG48 685 aaKnown RBP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 GABRA1P14867 456 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 ARR3P36575 388 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 MGAT2Q10469 447 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 CEP78Q5JTW2 689 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 SNX29P2Q8IUI4 249 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 TOMM5Q8N4H5 51 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 ZNF845Q96IR2 970 aaPredicted RBP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 ATG5Q9H1Y0 275 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 GPN1Q9HCN4 374 aaPredicted RBP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 ERVK13-1Q9NX77 482 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 ASH2LQ9UBL3 628 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 EXTL2Q9UBQ6 330 aa7.46□□□□□ -1.21
PTPRD-204ENST00000397606 TMEFF2Q9UIK5 374 aaPredicted RBP7.46□□□□□ -1.21
PTPRD-204ENST00000397606 ASXL3Q9C0F0 2248 aa7.46□□□□□ -1.22
PTPRD-204ENST00000397606 SSNA1O43805 119 aa7.46□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF17P17021 662 aa7.46□□□□□ -1.22
PTPRD-204ENST00000397606 ZNF169Q14929 603 aaPredicted RBP7.46□□□□□ -1.22
PTPRD-204ENST00000397606 FXNQ16595 210 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms