RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 SELENONQ9NZV5 590 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 ZIM2Q9NZV7 527 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 KLHL14Q9P2G3 628 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 SLC7A8Q9UHI5 535 aa7.49□□□□□ -1.21
CAPN3-208ENST00000397204 TRRAPQ9Y4A5 3859 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 A0A1W2PPW3 197 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 C5orf58C9J3I9 102 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 PLPP3O14495 311 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 PLPP2O43688 288 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 PTHP01270 115 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 BGLAPP02818 100 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 NAT2P11245 290 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 CBLP22681 906 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 GATA3P23771 443 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 CRYBB2P43320 205 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 POLR2JP52435 117 aaKnown RBP7.48□□□□□ -1.21
CAPN3-208ENST00000397204 TEKQ02763 1124 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 PUDPQ08623 228 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 CAMK2DQ13557 499 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 RAB39AQ14964 217 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 MAD2L1BPQ15013 274 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-208ENST00000397204 NKPD1Q17RQ9 610 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 C6orf10Q5SRN2 563 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 HHATQ5VTY9 493 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 NXNQ6DKJ4 435 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 RGS7BPQ6MZT1 257 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-208ENST00000397204 CDPF1Q6NVV7 123 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 TMEM154Q6P9G4 183 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 DHRS4L2Q6PKH6 230 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 DPPA2Q7Z7J5 298 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 KRT73Q86Y46 540 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 SKA3Q8IX90 412 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 MREGQ8N565 214 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 BHLHE22Q8NFJ8 381 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-208ENST00000397204 FBLIM1Q8WUP2 373 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 C11orf40Q8WZ69 217 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 GTF2H4Q92759 462 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 MAL2Q969L2 176 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 VPS33AQ96AX1 596 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 SPATA5L1Q9BVQ7 753 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 ASPNQ9BXN1 380 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 C1orf198Q9H425 327 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 TMEM27Q9HBJ8 222 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 HINT3Q9NQE9 182 aaKnown RBP7.48□□□□□ -1.21
CAPN3-208ENST00000397204 SDR39U1Q9NRG7 319 aaPredicted RBP7.48□□□□□ -1.21
CAPN3-208ENST00000397204 THAP1Q9NVV9 213 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 MED29Q9NX70 200 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 TAAR3PQ9P1P4 343 aa7.48□□□□□ -1.21
CAPN3-208ENST00000397204 MYEF2Q9P2K5 600 aaKnown RBP7.48□□□□□ -1.21
CAPN3-208ENST00000397204 IGLV3-9A0A075B6K5 115 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 A0A0G2JMP0 313 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 A0A0X1KG70 313 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 PRORSD1PA6NEY8 169 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 C17orf100A8MU93 164 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 UBDO15205 165 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 MGRN1O60291 552 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 SNNO75324 88 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-208ENST00000397204 NCR1O76036 304 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 MPZL1O95297 269 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 BCL10O95999 233 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 MT-ATP6P00846 226 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 OR8G3PP0DMU2 310 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 B4GALT1P15291 398 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF250P15622 560 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 AHCYP23526 432 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 FPR2P25090 351 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 HTR2AP28223 471 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 RAD52P43351 418 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 MAGEB1P43366 347 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 CSNK1A1P48729 337 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 KLF3P57682 345 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-208ENST00000397204 CCL8P80075 99 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 OR1Q1Q15612 314 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 GTDC1Q4AE62 458 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 TNFAIP8L3Q5GJ75 292 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 REEP3Q6NUK4 255 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 WDR93Q6P2C0 686 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 C1QL2Q7Z5L3 287 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 ZDHHC13Q8IUH4 622 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF584Q8IVC4 421 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 SLC22A24Q8N4F4 322 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 OR4M2Q8NGB6 313 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 OR6X1Q8NH79 312 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF519Q8TB69 540 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 NANPQ8TBE9 248 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 SYNPRQ8TBG9 265 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 SNX33Q8WV41 574 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 RAB1CQ92928 201 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 TMEM54Q969K7 222 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 RAB39BQ96DA2 213 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 MAELQ96JY0 434 aaKnown RBP7.47□□□□□ -1.21
CAPN3-208ENST00000397204 PAIP2Q9BPZ3 127 aaKnown RBP7.47□□□□□ -1.21
CAPN3-208ENST00000397204 TMEM43Q9BTV4 400 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 RSPO3Q9BXY4 272 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-208ENST00000397204 PAIP1Q9H074 479 aaKnown RBP7.47□□□□□ -1.21
CAPN3-208ENST00000397204 ZNF665Q9H7R5 613 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 EVA1AQ9H8M9 152 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 NTN4Q9HB63 628 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 GLTPQ9NZD2 209 aa7.47□□□□□ -1.21
CAPN3-208ENST00000397204 FZR1Q9UM11 496 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms