RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ZNF546Q86UE3 836 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 TMEM200AQ86VY9 491 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 ADGRF3Q8IZF5 1079 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 LILRA2Q8N149 483 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 PDXPQ96GD0 296 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 NMNAT3Q96T66 252 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 PECRQ9BY49 303 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 OCEL1Q9H607 264 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 WDR76Q9H967 626 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 BCO1Q9HAY6 547 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 HES4Q9HCC6 221 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 USP22Q9UPT9 525 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 GOLT1BQ9Y3E0 138 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 SLCO1B1Q9Y6L6 691 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 TNFRSF10AO00220 468 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 GLAP06280 429 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 TBXA2RP21731 343 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 IVDP26440 423 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 IRS1P35568 1242 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 SPEM2Q0P670 501 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 BEX5Q5H9J7 111 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 C18orf63Q68DL7 685 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 ANKRD16Q6P6B7 361 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 B3GNT7Q8NFL0 401 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 SEMA6DQ8NFY4 1073 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 OR10AD1Q8NGE0 317 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 OR13J1Q8NGT2 312 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 OR10J5Q8NHC4 309 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 ZNRF4Q8WWF5 429 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 ZBP1Q9H171 429 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 FGF22Q9HCT0 170 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 FAM212BQ9NTI7 297 aaPredicted RBP6.63□□□□□ -1.35
UPF2-203ENST00000397053 ADAMTS6Q9UKP5 1117 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 RCE1Q9Y256 329 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 SNED1Q8TER0 1413 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 PLRG1O43660 514 aaKnown RBP6.63□□□□□ -1.35
UPF2-203ENST00000397053 CXCL13O43927 109 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 UBBP0CG47 229 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 PRKACAP17612 351 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 FECHP22830 423 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 C21orf33P30042 268 aaPredicted RBP6.63□□□□□ -1.35
UPF2-203ENST00000397053 GPR12P47775 334 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 PPT1P50897 306 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 ZNF750Q32MQ0 723 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 DBX2Q6ZNG2 339 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 SSX9Q7RTT3 188 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 BAGE3Q86Y29 109 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 BAGE2Q86Y30 109 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 SUMF1Q8NBK3 374 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 OR2AE1Q8NHA4 323 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 LMO3Q8TAP4 145 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 WBP2Q969T9 261 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 ELSPBP1Q96BH3 223 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 MOB3AQ96BX8 217 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 C8orf44Q96CB5 159 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 TRMT61AQ96FX7 289 aaKnown RBP6.63□□□□□ -1.35
UPF2-203ENST00000397053 SMIM14Q96QK8 99 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 GSTO2Q9H4Y5 243 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 NARFLQ9H6Q4 476 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 DCAF13Q9NV06 445 aaKnown RBP6.63□□□□□ -1.35
UPF2-203ENST00000397053 SPAG17Q6Q759 2223 aa6.63□□□□□ -1.35
UPF2-203ENST00000397053 DIDO1Q9BTC0 2240 aaKnown RBP6.63□□□□□ -1.35
UPF2-203ENST00000397053 TMEM82A0PJX8 343 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 SH2D1BO14796 132 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 EIF4E2O60573 245 aaKnown RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 WDR1O75083 606 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 CSO75390 466 aaKnown RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 PENKP01210 267 aaPredicted RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 OR2T7P0C7T2 308 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 FAM157BP0CG42 384 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 SMIM17P0DL12 118 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 GIFP27352 417 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 EIF2DP41214 584 aaKnown RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 ERHP84090 104 aaKnown RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 C6orf89Q6UWU4 347 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 TRILQ7L0X0 811 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 ADGRG3Q86Y34 549 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 NAXDQ8IW45 347 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 LINC01599Q8WXQ3 324 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 SEH1LQ96EE3 360 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 OR2B2Q9GZK3 357 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 SCPEP1Q9HB40 452 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 AHCTF1Q8WYP5 2266 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 FAM90A27PA6NNH2 459 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 AGFG2O95081 481 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 NUDT7P0C024 238 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 AADACP22760 399 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 RFC3P40938 356 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 MAGEB1P43366 347 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 FOXA1P55317 472 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 SIX1Q15475 284 aaPredicted RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 IDO2Q6ZQW0 420 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 LSRQ86X29 649 aaPredicted RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 BATF2Q8N1L9 274 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 KDF1Q8NAX2 398 aaPredicted RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 OR5M1Q8NGP8 315 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 OR2T6Q8NHC8 308 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 RDH5Q92781 318 aa6.62□□□□□ -1.35
UPF2-203ENST00000397053 MRPS24Q96EL2 167 aaKnown RBP6.62□□□□□ -1.35
UPF2-203ENST00000397053 CSF3RQ99062 836 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms