RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 ANKUB1A6NFN9 424 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 TRIM64A6NGJ6 449 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 FRS3O43559 492 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 PRAMEF4O60810 478 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 STK17BO94768 372 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 MVDP53602 400 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 BTG2P78543 158 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 HSF1Q00613 529 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 HNRNPA0Q13151 305 aaKnown RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 RNASE10Q5GAN6 216 aaKnown RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 PRAMEF9Q5VWM5 478 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 IL20RBQ6UXL0 311 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SYT9Q86SS6 491 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SLC22A24Q8N4F4 322 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 METTL27Q8N6F8 245 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 CYB561A3Q8NBI2 242 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 GPX7Q96SL4 187 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 CACNG6Q9BXT2 260 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 GP6Q9HCN6 339 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SEMA4GQ9NTN9 838 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 EDARQ9UNE0 448 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 CA5BQ9Y2D0 317 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 TMED7Q9Y3B3 224 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 FRYLO94915 3013 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF587BE7ETH6 402 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 SPINT1O43278 529 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 TAS2R46P59540 309 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 OR7E24Q6IFN5 339 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 NEK7Q8TDX7 302 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 AKAP1Q92667 903 aaKnown RBP eCLIP3.09□□□□□ -1.92
VPS13C-203ENST00000395896 GHSRQ92847 366 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 C3orf49Q96BT1 292 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 MUCL1Q96DR8 90 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 BORCS8Q96FH0 119 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 PDCD10Q9BUL8 212 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 PLK3Q9H4B4 646 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 B3GAT1Q9P2W7 334 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 CAMK2AQ9UQM7 478 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 LAMA1P25391 3075 aa3.09□□□□□ -1.92
VPS13C-203ENST00000395896 IGLV3-12A0A075B6K2 115 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 FUOMA2VDF0 154 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 DISC1C4P0D8 188 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MKRN2OSH3BPM6 223 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 AQP8O94778 261 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CD1AP06126 327 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CD1EP15812 388 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MSR1P21757 451 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RPS5P46782 204 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TAS2R19P59542 299 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CDK5Q00535 292 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 OR7A5Q15622 319 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM176BQ3YBM2 270 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 C4orf46Q504U0 113 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ISLR2Q6UXK2 745 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF283Q8N7M2 679 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 LSM14AQ8ND56 463 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SAP25Q8TEE9 199 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 FAM60AQ9NP50 221 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ABCB9Q9NP78 766 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM221A6NGB7 291 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 M0R296 226 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GNB5O14775 395 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 POU3F2P20265 443 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TUBG1P23258 451 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SFTPDP35247 375 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SOX3P41225 446 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MMP16P51512 607 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TAS2R31P59538 309 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GABREP78334 506 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 PPA1Q15181 289 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SLC16A14Q7RTX9 510 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 C17orf82Q86X59 251 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TMEM41AQ96HV5 264 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TNFRSF13CQ96RJ3 184 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CLCC1Q96S66 551 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 CTRCQ99895 268 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 RNF121Q9H920 327 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SMURF1Q9HCE7 757 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TUBG2Q9NRH3 451 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SLC6A13Q9NSD5 602 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GABRPO00591 440 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 IFNA7P01567 189 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ACVR1BP36896 505 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ERVK-25P63136 954 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZXDAP98168 799 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 SLC35D2Q76EJ3 337 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 FBLIM1Q8WUP2 373 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 NMNAT3Q96T66 252 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ADAMTS9Q9P2N4 1935 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ZNF891A8MT65 544 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 WRBO00258 174 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 NARSO43776 548 aaKnown RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 ENPP1P22413 925 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 GRPRP30550 384 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 NAA10P41227 235 aaPredicted RBP3.08□□□□□ -1.92
VPS13C-203ENST00000395896 LINGO2Q7L985 606 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 TBX5Q99593 518 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 FAM173AQ9BQD7 235 aa3.08□□□□□ -1.92
VPS13C-203ENST00000395896 MFRPQ9BY79 579 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms