RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 TTYH2Q9BSA4 534 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 BRD7Q9NPI1 651 aa13.54□□□□□ -0.24
GPC3-202ENST00000394299 TMEM221A6NGB7 291 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 M0R296 226 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 SLC19A2O60779 497 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 COX6A1P12074 109 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 KLK2P20151 261 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 MPLP40238 635 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 POU3F1Q03052 451 aaPredicted RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 SNTA1Q13424 505 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 NTRK2Q16620 822 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 MTFR2Q6P444 385 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 FAM220AQ7Z4H9 259 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 PRSS35Q8N3Z0 413 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 OTOSQ8NHW6 89 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 RPS4Y2Q8TD47 263 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 NSMAFQ92636 917 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 KIAA1143Q96AT1 154 aaPredicted RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 UBL7Q96S82 380 aaPredicted RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 WACQ9BTA9 647 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 NDEL1Q9GZM8 345 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 NOTOA8MTQ0 251 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 SEC14L5O43304 696 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 FZD7O75084 574 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 ARL6IP5O75915 188 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 ADRB1P08588 477 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 TACSTD2P09758 323 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 HOXD12P35452 270 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 ZNF41P51814 821 aaPredicted RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 TLE3Q04726 772 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 TRIQKQ629K1 86 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 ASB18Q6ZVZ8 466 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 H1FNTQ75WM6 255 aaPredicted RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 IZUMO1Q8IYV9 350 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 C19orf18Q8NEA5 215 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 OR5AK2Q8NH90 309 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 SLC22A8Q8TCC7 542 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 IMMP1LQ96LU5 166 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 C5orf34Q96MH7 638 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 WDR54Q9H977 334 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 ELOVL3Q9HB03 270 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 VSX1Q9NZR4 365 aaPredicted RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 RPH3AQ9Y2J0 694 aaPredicted RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 MRPS7Q9Y2R9 242 aaKnown RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
GPC3-202ENST00000394299 CHCHD2Q9Y6H1 151 aaPredicted RBP13.53□□□□□ -0.24
GPC3-202ENST00000394299 LOC102723996A0A087X1L8 192 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 GATBO75879 557 aaKnown RBP13.52□□□□□ -0.24
GPC3-202ENST00000394299 PNPP00491 289 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 SP9P0CG40 484 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 NPR2P20594 1047 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 ADAM8P78325 824 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 MYBPHQ13203 477 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 METAP1DQ6UB28 335 aaPredicted RBP13.52□□□□□ -0.24
GPC3-202ENST00000394299 TRILQ7L0X0 811 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 BPHLQ86WA6 291 aaPredicted RBP13.52□□□□□ -0.24
GPC3-202ENST00000394299 LRRC28Q86X40 367 aaPredicted RBP13.52□□□□□ -0.24
GPC3-202ENST00000394299 ZNF248Q8NDW4 579 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 DNAAF1Q8NEP3 725 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 OR2M3Q8NG83 312 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 OR2G2Q8NGZ5 317 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 MFSD8Q8NHS3 518 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 MRPL48Q96GC5 212 aaKnown RBP13.52□□□□□ -0.24
GPC3-202ENST00000394299 CDCP1Q9H5V8 836 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 ZNF160Q9HCG1 818 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 SLC22A13Q9Y226 551 aa13.52□□□□□ -0.24
GPC3-202ENST00000394299 LIPT2A6NK58 231 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 ZNF814B7Z6K7 855 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 GPRIN2O60269 458 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 SFTPDP35247 375 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 TMED10P49755 219 aaKnown RBP13.52□□□□□ -0.25
GPC3-202ENST00000394299 NKX2-5P52952 324 aaPredicted RBP13.52□□□□□ -0.25
GPC3-202ENST00000394299 CBX3Q13185 183 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 TRA2AQ13595 282 aaKnown RBP eCLIP13.52□□□□□ -0.252e-7■■□□□ 13.6
GPC3-202ENST00000394299 PAMR1Q6UXH9 720 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 ZNF517Q6ZMY9 492 aaPredicted RBP13.52□□□□□ -0.25
GPC3-202ENST00000394299 DDIT4LQ96D03 193 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 SLC22A4Q9H015 551 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 ADAM30Q9UKF2 790 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 GTF2A1LQ9UNN4 478 aa13.52□□□□□ -0.25
GPC3-202ENST00000394299 TRABD2BA6NFA1 517 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 OR4C45A6NMZ5 311 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 A8MV72 311 aaPredicted RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 CD1AP06126 327 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 KIR3DL2P43630 455 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 SRP9P49458 86 aaKnown RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 YIF1BQ5BJH7 314 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 ZNF468Q5VIY5 522 aaPredicted RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 ZNF57Q68EA5 555 aaPredicted RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 PRSS45Q7RTY3 260 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 KCTD20Q7Z5Y7 419 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 LINC00346Q8IVM7 164 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 UBQLNLQ8IYU4 475 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 OR11G2Q8NGC1 345 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 ASB10Q8WXI3 467 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 KCTD12Q96CX2 325 aaKnown RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 NKX3-1Q99801 234 aaPredicted RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 HDHD2Q9H0R4 259 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 ZCCHC4Q9H5U6 513 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 FBXO4Q9UKT5 387 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms