RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 MBOAT2Q6ZWT7 520 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 RRM2BQ7LG56 351 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 IGFN1Q86VF2 1251 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 SKA3Q8IX90 412 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 CDK20Q8IZL9 346 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 RNF113BQ8IZP6 322 aaKnown RBP26.67■■□□□ 1.86
CMTM4-202ENST00000394106 SLC22A24Q8N4F4 322 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 MCHR2Q969V1 340 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 MRPL13Q9BYD1 178 aaKnown RBP26.67■■□□□ 1.86
CMTM4-202ENST00000394106 TMEM38BQ9NVV0 291 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 MAGEL2Q9UJ55 1249 aa26.67■■□□□ 1.86
CMTM4-202ENST00000394106 hCG_2039718K7EN88 272 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 SSX4O60224 188 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 UBL3O95164 117 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 RAB36O95755 333 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 BMP4P12644 408 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 GPR4P46093 362 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 GIPRP48546 466 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 HGFACQ04756 655 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 RAB35Q15286 201 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 ARMC4Q5T2S8 1044 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 GKAP1Q5VSY0 366 aaPredicted RBP26.66■■□□□ 1.86
CMTM4-202ENST00000394106 OAFQ86UD1 273 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 DEFB107AQ8IZN7 70 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 OR13C2Q8NGS9 318 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 MS4A3Q96HJ5 214 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 TXNIPQ9H3M7 391 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 GORASP2Q9H8Y8 452 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 NDE1Q9NXR1 346 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 NDUFAF4Q9P032 175 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 STX18Q9P2W9 335 aaKnown RBP26.66■■□□□ 1.86
CMTM4-202ENST00000394106 CD300AQ9UGN4 299 aa26.66■■□□□ 1.86
CMTM4-202ENST00000394106 H1F0P07305 194 aaKnown RBP26.65■■□□□ 1.86
CMTM4-202ENST00000394106 PATE4P0C8F1 98 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 OR8G3PP0DMU2 310 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 SERPINF1P36955 418 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 ZNF84P51523 738 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 NUDT6P53370 316 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 RAB1AP62820 205 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 HIST3H3Q16695 136 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 IL17RDQ8NFM7 739 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 TNFRSF13CQ96RJ3 184 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 SEPHS2Q99611 448 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 SH3GL3Q99963 347 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 ANKRD19PQ9H560 264 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 PMF1-BGLAPU3KQ54 211 aa26.65■■□□□ 1.86
CMTM4-202ENST00000394106 CENPBD1B2RD01 187 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 H7C417 338 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 ENTPD5O75356 428 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 DIRAS1O95057 198 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 FARS2O95363 451 aaKnown RBP26.64■■□□□ 1.86
CMTM4-202ENST00000394106 CTXN1P60606 82 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 MST1LQ2TV78 715 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 FGD3Q5JSP0 725 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 PODNL1Q6PEZ8 512 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 FITM2Q8N6M3 262 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 NUP37Q8NFH4 326 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 OR4K5Q8NGD3 323 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 FGFBP3Q8TAT2 258 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 SLC7A13Q8TCU3 470 aa26.64■■□□□ 1.86
CMTM4-202ENST00000394106 HDAC2Q92769 488 aaKnown RBP26.64■■□□□ 1.86
CMTM4-202ENST00000394106 NPIPB13A6NJU9 1138 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 FAM171A2A8MVW0 826 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 NPIPB4C9JG80 1138 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 LY6G6DO95868 133 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 FAM107AO95990 144 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 OR4A8P0C604 315 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 ZNF14P17017 642 aaPredicted RBP26.63■■□□□ 1.85
CMTM4-202ENST00000394106 RHCEP18577 417 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 SNRPD2P62316 118 aaKnown RBP26.63■■□□□ 1.85
CMTM4-202ENST00000394106 VLDLRP98155 873 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 CD47Q08722 323 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 KRT72Q14CN4 511 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 ADIPOQQ15848 244 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 FXNQ16595 210 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 SWI5Q1ZZU3 235 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 C7orf34Q96L11 122 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 ZNF75AQ96N20 296 aa26.63■■□□□ 1.85
CMTM4-202ENST00000394106 DENND2DQ9H6A0 471 aaPredicted RBP26.63■■□□□ 1.85
CMTM4-202ENST00000394106 ZNF346Q9UL40 294 aaKnown RBP26.63■■□□□ 1.85
CMTM4-202ENST00000394106 RNF223E7ERA6 249 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 ARPC2O15144 300 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 SLC2A10O95528 541 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 THBS4P35443 961 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 SLC9A3P48764 834 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 MNAT1P51948 309 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 RPL27P61353 136 aaKnown RBP26.62■■□□□ 1.85
CMTM4-202ENST00000394106 RAB39AQ14964 217 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 TAF11Q15544 211 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 KRT80Q6KB66 452 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 LRRC75AQ8NAA5 344 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 CCDC197Q8NCU1 140 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 PYURFQ96I23 114 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 NSMCE2Q96MF7 247 aa26.62■■□□□ 1.85
CMTM4-202ENST00000394106 A0A1W2PRQ8 180 aa26.61■■□□□ 1.85
CMTM4-202ENST00000394106 CDC42EP2O14613 210 aa26.61■■□□□ 1.85
CMTM4-202ENST00000394106 FMODQ06828 376 aa26.61■■□□□ 1.85
CMTM4-202ENST00000394106 SNTB2Q13425 540 aaKnown RBP26.61■■□□□ 1.85
CMTM4-202ENST00000394106 FHL1Q13642 323 aa26.61■■□□□ 1.85
CMTM4-202ENST00000394106 DAG1Q14118 895 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms