RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SPINK2P20155 84 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 NME2P22392 152 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 GABRA5P31644 462 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 UGT2B10P36537 528 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 CD97P48960 835 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 P2RY4P51582 365 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 GBX2P52951 348 aaPredicted RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 SOX8P57073 446 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 CARD18P57730 90 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 TUBA1BP68363 451 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 FMODQ06828 376 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 CDC20Q12834 499 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 CAMK2DQ13557 499 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 ETFDHQ16134 617 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 HBMQ6B0K9 141 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 DNM1P34Q6PK57 102 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 ARL9Q6T311 187 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 GDPGP1Q6ZNW5 385 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 TUBA1AQ71U36 451 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 VASH1Q7L8A9 365 aaPredicted RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 WDFY1Q8IWB7 410 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 TIGD4Q8IY51 512 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 MDS2Q8NDY4 140 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 DYNC2LI1Q8TCX1 351 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 THEM6Q8WUY1 208 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 NSMAFQ92636 917 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 RBP7Q96R05 134 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 TIMP4Q99727 224 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 TTTY12Q9BZ98 90 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 WDR76Q9H967 626 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 FANCFQ9NPI8 374 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 LAMP5Q9UJQ1 280 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 RASD1Q9Y272 281 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 COA3Q9Y2R0 106 aaPredicted RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 IGLV1-36A0A0B4J1U3 117 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 SLC35F4A4IF30 521 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 NPIPA2E9PIF3 369 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 NPIPA3F8WFD2 350 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 ZNF593O00488 134 aaPredicted RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 KLK10O43240 276 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 FZD7O75084 574 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 CELA3AP09093 270 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 RPS27P42677 84 aaKnown RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 MAGEA5P43359 124 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 CAPZA2P47755 286 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 EIF1AXP47813 144 aaKnown RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 BLVRAP53004 296 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 CLDN17P56750 224 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 TAS2R43P59537 309 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 PPIAP62937 165 aaKnown RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 BDH1Q02338 343 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 HSF2Q03933 536 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 GLO1Q04760 184 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 SLC3A1Q07837 685 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 ZNF766Q5HY98 468 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 C22orf42Q6IC83 251 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 RPTNQ6XPR3 784 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 DPY19L4Q7Z388 723 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 HDDC2Q7Z4H3 204 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 CDC20BQ86Y33 519 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 FDCSPQ8NFU4 85 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 HAS2Q92819 552 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 UCN2Q96RP3 112 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 KCNK17Q96T54 332 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 HDHD5Q9BXW7 423 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 SRXN1Q9BYN0 137 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 CCDC86Q9H6F5 360 aaKnown RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 ZNF703Q9H7S9 590 aaPredicted RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 IKZF2Q9UKS7 526 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 ZMIZ1Q9ULJ6 1067 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 GRIP1Q9Y3R0 1128 aa7.72□□□□□ -1.17
TDP1-203ENST00000393454 SIRT4Q9Y6E7 314 aaPredicted RBP7.72□□□□□ -1.17
TDP1-203ENST00000393454 CD8B2A6NJW9 211 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 CDK2AP1O14519 115 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 TRAF3IP2O43734 574 aaPredicted RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 CXCL13O43927 109 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 KHDRBS3O75525 346 aaKnown RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 CLPXO76031 633 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 IGHG1P01857 330 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 HPNP05981 417 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 SPARCP09486 303 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 CD8BP10966 210 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 ZNF823P16415 610 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 ENPP1P22413 925 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 PSMB10P40306 273 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 SUCLG1P53597 346 aaKnown RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 RAC3P60763 192 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 ADAM8P78325 824 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 H3F3AP84243 136 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 FABP5Q01469 135 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 SRYQ05066 204 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 ZNF239Q16600 458 aaKnown RBP7.71□□□□□ -1.17
TDP1-203ENST00000393454 MEP1BQ16820 701 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 CDONQ4KMG0 1287 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 PDSS1Q5T2R2 415 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 PLEKHG7Q6ZR37 379 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 ESPNLQ6ZVH7 1005 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 FAM220AQ7Z4H9 259 aa7.71□□□□□ -1.17
TDP1-203ENST00000393454 GGNQ86UU5 652 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms