RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 FXNQ16595 210 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 ALKBH6Q3KRA9 238 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 SLC30A8Q8IWU4 369 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 ZNF540Q8NDQ6 660 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 OR4K5Q8NGD3 323 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 TSPEARQ8WU66 669 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 TMEM255BQ8WV15 326 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 SLC25A44Q96H78 314 aaPredicted RBP14.25□□□□□ -0.13
PTPRK-208ENST00000392449 ZNF347Q96SE7 839 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 TMEM38BQ9NVV0 291 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 ZNF229Q9UJW7 825 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 M0R233 179 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 SYNGR3O43761 229 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 QDPRP09417 244 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 TACSTD2P09758 323 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 FAM157BP0CG42 384 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 GLRXP35754 106 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 OR1E2P47887 323 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 ERVS71-1P61550 626 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 GALK2Q01415 458 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 RPL18Q07020 188 aaKnown RBP14.25□□□□□ -0.13
PTPRK-208ENST00000392449 CR1LQ2VPA4 569 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 ELFN2Q5R3F8 820 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 DEF8Q6ZN54 512 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 CCDC80Q76M96 950 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 PIWIL3Q7Z3Z3 882 aaKnown RBP14.25□□□□□ -0.13
PTPRK-208ENST00000392449 NANOGNBQ7Z5D8 188 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 SNX32Q86XE0 403 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 CALHM3Q86XJ0 350 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 SYT14Q8NB59 555 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 MPP4Q96JB8 637 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 NARFLQ9H6Q4 476 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 C20orf141Q9NUB4 165 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 DUSP13Q9UII6 198 aa14.25□□□□□ -0.13
PTPRK-208ENST00000392449 DHHO43323 396 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 NCR1O76036 304 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 HIST1H2ABP04908 130 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 NAT2P11245 290 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 H2AFXP16104 143 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-208ENST00000392449 FUT1P19526 365 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 FUT4P22083 530 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 COL8A2P25067 703 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 AQP2P41181 271 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 CHN2P52757 468 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 PIN1Q13526 163 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-208ENST00000392449 INTS11Q5TA45 600 aaKnown RBP14.24□□□□□ -0.13
PTPRK-208ENST00000392449 REP15Q6BDI9 236 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 CGB2Q6NT52 195 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 HIST3H2AQ7L7L0 130 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 HIST1H2ACQ93077 130 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 LRRC58Q96CX6 371 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 TSPAN32Q96QS1 320 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 VIPAS39Q9H9C1 493 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 FBXO9Q9UK97 447 aaPredicted RBP14.24□□□□□ -0.13
PTPRK-208ENST00000392449 SPEF1Q9Y4P9 236 aa14.24□□□□□ -0.13
PTPRK-208ENST00000392449 PIP5K1CO60331 668 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 BCL10O95999 233 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 CLPTM1O96005 669 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 SERPINA5P05154 406 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 OR8G3PP0DMU2 310 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 CLRN1P58418 232 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 TAS2R41P59536 307 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 CYLC2Q14093 348 aaPredicted RBP14.23□□□□□ -0.13
PTPRK-208ENST00000392449 METTL21CQ5VZV1 264 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 SLC30A7Q8NEW0 376 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 MOSPD2Q8NHP6 518 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 MCHR2Q969V1 340 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 ECSITQ9BQ95 431 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 SLC19A3Q9BZV2 496 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 FGFR1OP2Q9NVK5 253 aa14.23□□□□□ -0.13
PTPRK-208ENST00000392449 GMPR2Q9P2T1 348 aaKnown RBP14.23□□□□□ -0.13
PTPRK-208ENST00000392449 A0A1W2PPW3 197 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 MRASO14807 208 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 WNT9BO14905 357 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 OR7A10O76100 309 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 IGHG1P01857 330 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 MT-ND1P03886 318 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 EVX1P49640 407 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 KLF10Q13118 480 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 MEX3DQ86XN8 651 aaKnown RBP14.22□□□□□ -0.13
PTPRK-208ENST00000392449 LRRC18Q8N456 261 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 NOXO1Q8NFA2 376 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 ASB10Q8WXI3 467 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 YIPF5Q969M3 257 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 ZNF583Q96ND8 569 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 SIKE1Q9BRV8 207 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 DENND2DQ9H6A0 471 aaPredicted RBP14.22□□□□□ -0.13
PTPRK-208ENST00000392449 RNF121Q9H920 327 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 SLC7A8Q9UHI5 535 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 RIMS3Q9UJD0 308 aa14.22□□□□□ -0.13
PTPRK-208ENST00000392449 IGKV1D-43A0A0B4J1Z2 117 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 LOC100653049A0A140TA62 436 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 MCIDASD6RGH6 385 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 TRMUO75648 421 aaKnown RBP14.21□□□□□ -0.13
PTPRK-208ENST00000392449 KRT34O76011 436 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 SLC2A10O95528 541 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 CDAP32320 146 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 FMODQ06828 376 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 HIST3H3Q16695 136 aa14.21□□□□□ -0.13
PTPRK-208ENST00000392449 MMEL1Q495T6 779 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms