RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 ESCO2Q56NI9 601 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 RNASE10Q5GAN6 216 aaKnown RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 OR2B11Q5JQS5 317 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 SOHLH1Q5JUK2 328 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 MIIPQ5JXC2 388 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 FAM102AQ5T9C2 384 aaPredicted RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 VASNQ6EMK4 673 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 FAM71E1Q6IPT2 247 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 PRR5LQ6MZQ0 368 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 CES5AQ6NT32 575 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 Q6ZSR9 355 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 CYS1Q717R9 158 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 ASCL5Q7RTU5 278 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 NET1Q7Z628 596 aaPredicted RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 ZAR1Q86SH2 424 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 NPAS3Q8IXF0 933 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 LRRC25Q8N386 305 aaPredicted RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 SVOPLQ8N434 492 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 THAP8Q8NA92 274 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 MDS2Q8NDY4 140 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 ZNF548Q8NEK5 533 aaPredicted RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 SLC26A10Q8NG04 563 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 OR5L2Q8NGL0 311 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 OR1P1Q8NH06 330 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 ASB17Q8WXJ9 295 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 ATG4AQ8WYN0 398 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 OR8D1Q8WZ84 308 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 OR5P2Q8WZ92 322 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 GHSRQ92847 366 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 RAB8BQ92930 207 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 NEIL2Q969S2 332 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 TBRG4Q969Z0 631 aaKnown RBP eCLIP3□□□□□ -1.93
TRAJ17-201ENST00000390520 ZHX1-C8orf76Q96EF9 292 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 MED8Q96G25 268 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 TIMD4Q96H15 378 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 PPP3R2Q96LZ3 170 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 GPR78Q96P69 363 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 UHRF2Q96PU4 802 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 DCLRE1CQ96SD1 692 aaKnown RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 ATP5SQ99766 215 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 BTBD10Q9BSF8 475 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 CDCA4Q9BXL8 241 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 COL25A1Q9BXS0 654 aaPredicted RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 RNF26Q9BY78 433 aaPredicted RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 ACTR3CQ9C0K3 210 aaPredicted RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 COMMD4Q9H0A8 199 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 C5orf66Q9H5L9 145 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 ARMC7Q9H6L4 198 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 BCAS3Q9H6U6 928 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 RDH14Q9HBH5 336 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 MIEF1Q9NQG6 463 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 SLC17A5Q9NRA2 495 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 FGF21Q9NSA1 209 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 STARD5Q9NSY2 213 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 PRODH2Q9UF12 536 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 GLS2Q9UI32 602 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 CD84Q9UIB8 345 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 ZNF107Q9UII5 783 aaPredicted RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 DUSP13Q9UII6 198 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 PILRAQ9UKJ1 303 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 WDR83OSQ9Y284 106 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 SNX24Q9Y343 169 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 CPSF1Q10570 1443 aaKnown RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 PCM1Q15154 2024 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 THOC2Q8NI27 1593 aaKnown RBP3□□□□□ -1.93
TRAJ17-201ENST00000390520 ANKRD36BQ8N2N9 1353 aa3□□□□□ -1.93
TRAJ17-201ENST00000390520 CNTNAP5Q8WYK1 1306 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 TAF1P21675 1872 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 NAV1Q8NEY1 1877 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 MAGI1Q96QZ7 1491 aaPredicted RBP2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 PRAMEF33A0A0G2JMD5 474 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 GLYATL1P3A0A0U1RQE8 302 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 KIR2DS1A0A191URI9 304 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 ANKRD20A5PA0PJZ0 165 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 IGSF23A1L1A6 192 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 RNF212BA8MTL3 300 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 EFCAB9A8MZ26 197 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 EVPLLA8MZ36 301 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 B5MCH6 92 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 ZNF878C9JN71 531 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 ANKRD63C9JTQ0 380 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 G3V2T6 193 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 GPR31O00270 319 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 MSH4O15457 936 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 MPZL2O60487 215 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 SNX3O60493 162 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 PRAMEF10O60809 474 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 DUSP11O75319 330 aaKnown RBP2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 DIRAS1O95057 198 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 S1PR2O95136 353 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 IGSF6O95976 241 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 FAM107AO95990 144 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 C1RP00736 705 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 HLA-DOAP06340 250 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 CTSLP07711 333 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 CELA2BP08218 269 aaPredicted RBP2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 SLC35G4P0C7Q5 338 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 FAM87AP0C7U9 286 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 SMIM18P0DKX4 95 aa2.99□□□□□ -1.93
TRAJ17-201ENST00000390520 IRF2P14316 349 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms