RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PAPD4Q6PIY7 484 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 TRILQ7L0X0 811 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 KIAA0907Q7Z7F0 614 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 C12orf10Q9HB07 376 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 FBXO4Q9UKT5 387 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 RPS10-NUDT3A0A1W2PQS6 291 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC22A23A1A5C7 686 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 CDK2AP1O14519 115 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 PMP2P02689 132 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 GALP22466 123 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 RPS10P46783 165 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 CAV2P51636 162 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 NSDHLQ15738 373 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 PDSS1Q5T2R2 415 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 LINC00346Q8IVM7 164 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 FNDC9Q8TBE3 224 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 GHITMQ9H3K2 345 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 UBQLN4Q9NRR5 601 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 DZANK1Q9NVP4 752 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 NDUFB6O95139 128 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 MFSD13AQ14CX5 517 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF674Q2M3X9 581 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 C2orf76Q3KRA6 126 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC39A5Q6ZMH5 540 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 ABHD12BQ7Z5M8 362 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 MUC20Q8N307 709 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF565Q8N9K5 539 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 LHFPL5Q8TAF8 219 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 LMX1AQ8TE12 382 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 PPP1R1CQ8WVI7 109 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 SENP5Q96HI0 755 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF578Q96N58 590 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 C20orf24Q9BUV8 137 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 NTMQ9P121 344 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 VDAC3Q9Y277 283 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 HIF3AQ9Y2N7 669 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 NRXN2Q9P2S2 1712 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR2F2O95006 317 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZFPL1O95159 310 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 NPY4RP50391 375 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 TLE3Q04726 772 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR2F1Q13607 317 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC35D3Q5M8T2 416 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 ADAM5Q6NVV9 412 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 TMEM65Q6PI78 240 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 ACOT7LQ6ZUV0 252 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 MRPL43Q8N983 215 aaKnown RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 WDR34Q96EX3 536 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 SIGLEC11Q96RL6 698 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC5A7Q9GZV3 580 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 GAREM1Q9H706 876 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 METTL7AQ9H8H3 244 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 ADGRL4Q9HBW9 690 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 VSX1Q9NZR4 365 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 MSRAQ9UJ68 235 aa12.03□□□□□ -0.48
TRAPPC9-201ENST00000389328 OR6C65A6NJZ3 312 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 IFNA17P01571 189 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 MGMTP16455 207 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 EPHA4P54764 986 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 SNRPNP63162 240 aaKnown RBP12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 TMEM31Q5JXX7 168 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 ZNF547Q8IVP9 402 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 ST7LQ8TDW4 575 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 C10orf90Q96M02 699 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 PRDM7Q9NQW5 492 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 CPNE7Q9UBL6 633 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 SLC22A13Q9Y226 551 aa12.02□□□□□ -0.48
TRAPPC9-201ENST00000389328 A0A0J9YY10 115 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 C7orf66A4D0T2 115 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 SLC33A1O00400 549 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 OIP5O43482 229 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF41P51814 821 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 AGFG1P52594 562 aaKnown RBP12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 DPTQ07507 201 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 KDM8Q8N371 416 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 OR5D14Q8NGL3 314 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 SLAMF9Q96A28 289 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 EHFQ9NZC4 300 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 PRELID3BQ9Y3B1 194 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 CSAG2Q9Y5P2 127 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 SEC16AO15027 2179 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 P2RY10O00398 339 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 ZNF264O43296 627 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 HSPA12AO43301 675 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 SUSD5O60279 629 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 GNRHRP30968 328 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 TSFMP43897 325 aaKnown RBP12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 MELKQ14680 651 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 PRSS53Q2L4Q9 553 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 SGPP2Q8IWX5 399 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 FGF22Q9HCT0 170 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 FBXO34Q9NWN3 711 aa12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 PUS1Q9Y606 427 aaKnown RBP eCLIP12.02□□□□□ -0.49
TRAPPC9-201ENST00000389328 A0A1B0GTH9 108 aa12.01□□□□□ -0.49
TRAPPC9-201ENST00000389328 TO15178 435 aa12.01□□□□□ -0.49
TRAPPC9-201ENST00000389328 TMEM225BP0DP42 221 aa12.01□□□□□ -0.49
TRAPPC9-201ENST00000389328 NTSR1P30989 418 aa12.01□□□□□ -0.49
TRAPPC9-201ENST00000389328 S100A12P80511 92 aa12.01□□□□□ -0.49
TRAPPC9-201ENST00000389328 TMEM52BQ4KMG9 183 aa12.01□□□□□ -0.49
TRAPPC9-201ENST00000389328 LRRTM1Q86UE6 522 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms