RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 SRMSQ9H3Y6 488 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CLSTN2Q9H4D0 955 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 SLC25A19Q9HC21 320 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 CTPS2Q9NRF8 586 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 BLOC1S4Q9NUP1 217 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 NFKBIL1Q9UBC1 381 aaPredicted RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 MORF4L1Q9UBU8 362 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 FBXL3Q9UKT7 428 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 LUC7L2Q9Y383 392 aaKnown RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PCDHGA9Q9Y5G4 932 aaKnown RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PCDHGA8Q9Y5G5 932 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PCDHGA7Q9Y5G6 932 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 PCDHGA3Q9Y5H0 932 aa-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 DICER1Q9UPY3 1922 aaKnown RBP-3.09□□□□□ -2.9
RNU6-1340P-201ENST00000384438 DOCK11Q5JSL3 2073 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 NRCAMQ92823 1304 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 SCN9AQ15858 1988 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 ANKRD18BA2A2Z9 1011 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 GTPBP10A4D1E9 387 aaKnown RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PRRG1O14668 218 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 ARPC1BO15143 372 aaKnown RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 SLC31A2O15432 143 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 P2RX6O15547 441 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 NDUFS4O43181 175 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 MLNRO43193 412 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 NOS1APO75052 506 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 TACC1O75410 805 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 IGHV3-11P01762 117 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CSH1P0DML2 217 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CSH2P0DML3 217 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 KLRK1P26718 216 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 GABRB3P28472 473 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CCND3P30281 292 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 SLC7A1P30825 629 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 ZNF93P35789 620 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CETN2P41208 172 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 HINT1P49773 126 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 RGS7P49802 495 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 METAP1P53582 386 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CMC4P56277 68 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 OR4D2P58180 307 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 OR12D2P58182 307 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 SLC35A2P78381 396 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CRADDP78560 199 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PLOD1Q02809 727 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 ST3GAL3Q11203 375 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 BTN1A1Q13410 526 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 MOGQ16653 247 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 FAM133BQ5BKY9 247 aaKnown RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 RRAGBQ5VZM2 374 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 GPR139Q6DWJ6 353 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 DHRS11Q6UWP2 260 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 B3GLCTQ6Y288 498 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 LRRC28Q86X40 367 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 ZNF595Q8IYB9 648 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 RYBPQ8N488 228 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 ZNF555Q8NEP9 628 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 OR56A4Q8NGH8 313 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 OR4C15Q8NGM1 316 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 HMGB4Q8WW32 186 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 BIRC7Q96CA5 298 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 C19orf43Q9BQ61 176 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 REEP2Q9BRK0 252 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 TM6SF2Q9BZW4 377 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 FGF23Q9GZV9 251 aaPredicted RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 Q9HAA7 133 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 SEPSECSQ9HD40 501 aaKnown RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PLCB1Q9NQ66 1216 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 GEMIN8Q9NWZ8 242 aaKnown RBP-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PSG8Q9UQ74 426 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 LINC00588Q9Y4M8 146 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 GMEB1Q9Y692 573 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CDC42BPGQ6DT37 1551 aa-3.1□□□□□ -2.91
RNU6-1340P-201ENST00000384438 TMSB15BA0A087X1C1 80 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 LOC102724200A0A096LPH7 203 aaPredicted RBP-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 A0A1W2PRD5 423 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 A0A1W2PRF3 423 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 A0A1W2PRM7 423 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CLCA1A8K7I4 914 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 F6UB75 175 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CCER2I3L3R5 266 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CHEK1O14757 476 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CCL25O15444 150 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CFLARO15519 480 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PSTPIP1O43586 416 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CDC40O60508 579 aaKnown RBP eCLIP-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PGLYRP1O75594 196 aaPredicted RBP-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 BEST1O76090 585 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 GABARAPO95166 117 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 P04436 131 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 HIST1H2ABP04908 130 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 GOLGA6DP0CG33 693 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 IGHV3-43DP0DP04 118 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 F3P13726 295 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 HIST1H2ADP20671 130 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 EVI2BP34910 448 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 PNPLA4P41247 253 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 CYB561P49447 251 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 FHITP49789 147 aa-3.11□□□□□ -2.91
RNU6-1340P-201ENST00000384438 NOVA1P51513 510 aaKnown RBP-3.11□□□□□ -2.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms