RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 PRSS3P35030 304 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 VASPP50552 380 aaPredicted RBP17.26■□□□□ 0.35
CSPG5-202ENST00000383738 SPEM2Q0P670 501 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 DCAF12Q5T6F0 453 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 S1PR5Q9H228 398 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 CCL27Q9Y4X3 112 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 DVL2O14641 736 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 CASC3O15234 703 aaKnown RBP17.26■□□□□ 0.35
CSPG5-202ENST00000383738 BRINP1O60477 761 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 CLDN6P56747 220 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 TMEM176BQ3YBM2 270 aaPredicted RBP17.26■□□□□ 0.35
CSPG5-202ENST00000383738 NHLRC1Q6VVB1 395 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 KIAA0907Q7Z7F0 614 aaPredicted RBP17.26■□□□□ 0.35
CSPG5-202ENST00000383738 ESX1Q8N693 406 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 POTEKPQ9BYX7 375 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 SLC22A7Q9Y694 548 aa17.26■□□□□ 0.35
CSPG5-202ENST00000383738 TRAV20A0A0B4J274 112 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 A0A0B4J2A0 478 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 M0QYG6 137 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 ZNF264O43296 627 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 SNRNP70P08621 437 aaKnown RBP17.25■□□□□ 0.35
CSPG5-202ENST00000383738 LANCL3Q6ZV70 420 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 TMUB2Q71RG4 321 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 OR11H7Q8NGC8 314 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 DCUN1D4Q92564 292 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 PTDSS2Q9BVG9 487 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 SHPKQ9UHJ6 478 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 POMT2Q9UKY4 750 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 V9GY05 133 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 WDR81Q562E7 1941 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 MKI67P46013 3256 aaKnown RBP17.25■□□□□ 0.35
CSPG5-202ENST00000383738 CFDP00746 253 aaPredicted RBP17.25■□□□□ 0.35
CSPG5-202ENST00000383738 OCLNQ16625 522 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 ZNF283Q8N7M2 679 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 NANPQ8TBE9 248 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 ADAMTS18Q8TE60 1221 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 NXF5Q9H1B4 397 aaKnown RBP17.25■□□□□ 0.35
CSPG5-202ENST00000383738 OR51B6Q9H340 312 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 FBXO34Q9NWN3 711 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 EMC3Q9P0I2 261 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 KCNE1BA0A087WTH5 132 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 C1orf196B1AJZ1 125 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 ZNF593O00488 134 aaPredicted RBP17.25■□□□□ 0.35
CSPG5-202ENST00000383738 BTG1P62324 171 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 MAPK14Q16539 360 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 FXNQ16595 210 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 RNF170Q96K19 258 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 CCNL2Q96S94 520 aaPredicted RBP17.25■□□□□ 0.35
CSPG5-202ENST00000383738 MARVELD1Q9BSK0 173 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 TMEM38AQ9H6F2 299 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 MAN2C1Q9NTJ4 1040 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 KDM4EB2RXH2 506 aaPredicted RBP17.25■□□□□ 0.35
CSPG5-202ENST00000383738 UTS2O95399 124 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 HPXP02790 462 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 IGHV4-34P06331 123 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 LIMS3P0CW19 117 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 LIMS4P0CW20 117 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 ZXDCQ2QGD7 858 aaPredicted RBP17.25■□□□□ 0.35
CSPG5-202ENST00000383738 ZNF584Q8IVC4 421 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 KLHDC8BQ8IXV7 354 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 PFN4Q8NHR9 129 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 LIN7BQ9HAP6 207 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 ASIC5Q9NY37 505 aa17.25■□□□□ 0.35
CSPG5-202ENST00000383738 TRBV5-3A0A0A0MS03 114 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 TMEM129A0AVI4 362 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 DNAJB6O75190 326 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 WNT1P04628 370 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 ZNF43P17038 809 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 S100A2P29034 98 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 TPBGQ13641 420 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 PAN3Q58A45 887 aaKnown RBP17.24■□□□□ 0.35
CSPG5-202ENST00000383738 MAMDC2Q7Z304 686 aaPredicted RBP17.24■□□□□ 0.35
CSPG5-202ENST00000383738 CA13Q8N1Q1 262 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 ZNF511Q8NB15 262 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 OR2A5Q96R48 311 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 TMEM265A0A087WTH1 108 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 SELENOPP49908 381 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 SLC35D2Q76EJ3 337 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 PXT1Q8NFP0 134 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 LCORQ96JN0 433 aaPredicted RBP17.24■□□□□ 0.35
CSPG5-202ENST00000383738 BRCA2P51587 3418 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 SULT2B1O00204 365 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 PIPP12273 146 aaPredicted RBP17.24■□□□□ 0.35
CSPG5-202ENST00000383738 PPP3CBP16298 524 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 CXADRP78310 365 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 POU3F1Q03052 451 aaPredicted RBP17.24■□□□□ 0.35
CSPG5-202ENST00000383738 GLYR1Q49A26 553 aaPredicted RBP17.24■□□□□ 0.35
CSPG5-202ENST00000383738 RAB11FIP2Q7L804 512 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 NPRL2Q8WTW4 380 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 C20orf24Q9BUV8 137 aa17.24■□□□□ 0.35
CSPG5-202ENST00000383738 SERINC4A6NH21 518 aa17.23■□□□□ 0.35
CSPG5-202ENST00000383738 ACOT7O00154 380 aa17.23■□□□□ 0.35
CSPG5-202ENST00000383738 SLC16A7O60669 478 aa17.23■□□□□ 0.35
CSPG5-202ENST00000383738 HLA-AP01891 365 aaKnown RBP17.23■□□□□ 0.35
CSPG5-202ENST00000383738 RNASE10Q5GAN6 216 aaKnown RBP17.23■□□□□ 0.35
CSPG5-202ENST00000383738 RHOUQ7L0Q8 258 aa17.23■□□□□ 0.35
CSPG5-202ENST00000383738 C1orf210Q8IVY1 113 aa17.23■□□□□ 0.35
CSPG5-202ENST00000383738 SIDT1Q9NXL6 827 aaKnown RBP17.23■□□□□ 0.35
CSPG5-202ENST00000383738 SLCO1B1Q9Y6L6 691 aa17.23■□□□□ 0.35
CSPG5-202ENST00000383738 RAB3AP20336 220 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms