RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 GINS4Q9BRT9 223 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 EXOSC3Q9NQT5 275 aaKnown RBP8.13□□□□□ -1.11
GPNMB-202ENST00000381990 HPF1Q9NWY4 346 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 ANKRD10Q9NXR5 420 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 GNG8Q9UK08 70 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 PYCARD-AS1I3L0S3 204 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 SIGLEC6O43699 453 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 PPP1R3DO95685 299 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 HOXA6P31267 233 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 DCTDP32321 178 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 IGLV3-21P80748 117 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-202ENST00000381990 FGL1Q08830 312 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 EXOSC7Q15024 291 aaKnown RBP8.13□□□□□ -1.11
GPNMB-202ENST00000381990 SLC35D3Q5M8T2 416 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 CLVS2Q5SYC1 327 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 DCST2Q5T1A1 773 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 MRPL2Q5T653 305 aaKnown RBP8.13□□□□□ -1.11
GPNMB-202ENST00000381990 NKAIN2Q5VXU1 208 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 C17orf107Q6ZR85 190 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 KRT77Q7Z794 578 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 CCDC36Q8IYA8 594 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 ATOH1Q92858 354 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-202ENST00000381990 GCDHQ92947 438 aaPredicted RBP8.13□□□□□ -1.11
GPNMB-202ENST00000381990 GFI1Q99684 422 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 PDCD1LG2Q9BQ51 273 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF559Q9BR84 538 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 PURGQ9UJV8 347 aaKnown RBP8.13□□□□□ -1.11
GPNMB-202ENST00000381990 FBXL4Q9UKA2 621 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 CACNA1EQ15878 2313 aa8.13□□□□□ -1.11
GPNMB-202ENST00000381990 TRAV27A0A087WT01 109 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 IGHV1OR21-1A0A087WYE8 117 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 CCDC163A0A0D9SF12 145 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 A0A0D9SG52 128 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 GXYLT2A0PJZ3 443 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 FITM1A5D6W6 292 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 H7C417 338 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 CLDN4O14493 209 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 NUPL2O15504 423 aaKnown RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 RBBP9O75884 186 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 CBX7O95931 251 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 H2AFB1P0C5Y9 115 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 PTNP21246 168 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 CDK2P24941 298 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 CBX5P45973 191 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 HOXA1P49639 335 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 TAS2R20P59543 309 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 S100A12P80511 92 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 GRM7Q14831 915 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 PON3Q15166 354 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 GPR68Q15743 365 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 PDSS1Q5T2R2 415 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 TSSK4Q6SA08 328 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 UQCC3Q6UW78 93 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 GLB1L2Q8IW92 636 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 SLC35F3Q8IY50 421 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 SLC25A45Q8N413 288 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 OR5M1Q8NGP8 315 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 OR51A7Q8NH64 312 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 HOXB13Q92826 284 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 LRRC46Q96FV0 321 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 MFFQ9GZY8 342 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 ALX4Q9H161 411 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 TMEM27Q9HBJ8 222 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 MEPEQ9NQ76 525 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 PRTFDC1Q9NRG1 225 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 MTFP1Q9UDX5 166 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 OR5V1Q9UGF6 321 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 SLC6A5Q9Y345 797 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 RFPL4AA6NLU0 287 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 RFPL4AL1F8VTS6 287 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 H0YIG0 161 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 PIN1P1O15428 100 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 CDC123O75794 336 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 NKX2-2O95096 273 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 GYPBP06028 91 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF35P13682 527 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 GLB1P16278 677 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 GPR3P46089 330 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 OR1D5P58170 312 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 SSBP1Q04837 148 aaKnown RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 SLC6A19Q695T7 634 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 FCRLBQ6BAA4 426 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 DGAT2L6Q6ZPD8 337 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 PLXDC1Q8IUK5 500 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 RFLNBQ8N5W9 214 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF433Q8N7K0 673 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 TNFAIP8L1Q8WVP5 186 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 ZMYND19Q96E35 227 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 MMABQ96EY8 250 aaPredicted RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 PHYHIPLQ96FC7 376 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 RBM18Q96H35 190 aaKnown RBP8.12□□□□□ -1.11
GPNMB-202ENST00000381990 ZNF426Q9BUY5 554 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 POLE3Q9NRF9 147 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 RASL12Q9NYN1 266 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 NCDNQ9UBB6 729 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 CHRNA9Q9UGM1 479 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 NDRG3Q9UGV2 375 aa8.12□□□□□ -1.11
GPNMB-202ENST00000381990 ARID1BQ8NFD5 2236 aaPredicted RBP8.11□□□□□ -1.11
GPNMB-202ENST00000381990 ASXL3Q9C0F0 2248 aa8.11□□□□□ -1.11
GPNMB-202ENST00000381990 A0A0B4J2E0 115 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms