RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 SULT1A4P0DMN0 295 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TACR1P25103 407 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 GCGRP47871 477 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SPCS3P61009 180 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 UBE2KP61086 200 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PAFAH1B2P68402 229 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SLBPQ14493 270 aaKnown RBP eCLIP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ARL9Q6T311 187 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OSTM1Q86WC4 334 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TCTEX1D1Q8N7M0 179 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ESAMQ96AP7 390 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SERINC2Q96SA4 455 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 NGBQ9NPG2 151 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CACNG4Q9UBN1 327 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 A6NDN8 102 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OTOL1A6NHN0 477 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SHISA7A6NL88 538 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 GLCEO94923 617 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PLATP00750 562 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PRR35P0CG20 571 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CSNK1A1P48729 337 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SNRPEP62304 92 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PLCXD2Q0VAA5 305 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 EIF2B1Q14232 305 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 IRF3Q14653 427 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SOWAHAQ2M3V2 549 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 PCGF3Q3KNV8 242 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OR6C4Q8NGE1 309 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 OR4Q3Q8NH05 313 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 NANOS1Q8WY41 292 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 MMABQ96EY8 250 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF582Q96NG8 517 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 FIZ1Q96SL8 496 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 STACQ99469 402 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 SUCNR1Q9BXA5 334 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TRIP12Q14669 1992 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CXorf49A8MYA2 514 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 APEHP13798 732 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 XCR1P46094 333 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 TM4SF4P48230 202 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF140P52738 457 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 UBE2NP61088 152 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 IL13RA1P78552 427 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 AQP6Q13520 282 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 RAB35Q15286 201 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CNN3Q15417 329 aaKnown RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 BSXQ3C1V8 233 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ZNF805Q5CZA5 627 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 DHRS7BQ6IAN0 325 aaPredicted RBP4.52□□□□□ -1.69
PTPRD-203ENST00000381196 AADACL2Q6P093 401 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 BAP18Q8IXM2 172 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 ST6GAL2Q96JF0 529 aa4.52□□□□□ -1.69
PTPRD-203ENST00000381196 CDC14CA4D256 554 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 XRCC3O43542 346 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 TGM5O43548 720 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 PRKRAO75569 313 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 STK17BO94768 372 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 CYB5R3P00387 301 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 RPLP1P05386 114 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 GNB3P16520 340 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 IRF9Q00978 393 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 FAM74A1Q5RGS3 127 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 FAM160A2Q8N612 972 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 LRRN4Q8WUT4 740 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 TSLPQ969D9 159 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 TUBG2Q9NRH3 451 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 MRPS18AQ9NVS2 196 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 KCNIP1Q9NZI2 227 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 SRPK3Q9UPE1 567 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 SCN5AQ14524 2016 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 TNS1Q9HBL0 1735 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 A0A1B0GW64 132 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 A0A1W2PPQ1 181 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 C2orf78A6NCI8 922 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 ARPC1BO15143 372 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 ACTL6BO94805 426 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 CELP19835 753 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 GIFP27352 417 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 PCSK6P29122 969 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 SRP14P37108 136 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 TNFSF10P50591 281 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 HMGA2P52926 109 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 EVX2Q03828 476 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 MLF2Q15773 248 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 OR4A47Q6IF82 309 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 C8orf82Q6P1X6 216 aaPredicted RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 ENPP6Q6UWR7 440 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 ISCA2Q86U28 154 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 CALHM3Q86XJ0 350 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 DND1Q8IYX4 353 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 OR4A4PQ8NGN8 299 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 OR5M9Q8NGP3 310 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 PROKR1Q8TCW9 393 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 DAZLQ92904 295 aaKnown RBP4.51□□□□□ -1.69
PTPRD-203ENST00000381196 CASD1Q96PB1 797 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 OR51I1Q9H343 314 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 FOXJ3Q9UPW0 622 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 HEATR5BQ9P2D3 2071 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 OR5H15A6NDH6 313 aa4.51□□□□□ -1.69
PTPRD-203ENST00000381196 OR5H14A6NHG9 310 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms