RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ZNF83P51522 516 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 ERVK-25P63136 954 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 MYBPC1Q00872 1141 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 RUNX1T1Q06455 604 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 FHL1Q13642 323 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 TBRG1Q3YBR2 411 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 ANKDD1AQ495B1 522 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 ZER1Q7Z7L7 766 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 HS3ST5Q8IZT8 346 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 GALNT4Q8N4A0 578 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 WDR31Q8NA23 367 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 LRR1Q96L50 414 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 GPA33Q99795 319 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 RBM4BQ9BQ04 359 aaKnown RBP17■□□□□ 0.31
GTF3A-201ENST00000381140 RBM4Q9BWF3 364 aaKnown RBP17■□□□□ 0.31
GTF3A-201ENST00000381140 NDEL1Q9GZM8 345 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 TXNIPQ9H3M7 391 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 GLTPQ9NZD2 209 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 IL20RAQ9UHF4 553 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 POFUT2Q9Y2G5 429 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 LRRC42Q9Y546 428 aa17■□□□□ 0.31
GTF3A-201ENST00000381140 MAGED1Q9Y5V3 778 aaPredicted RBP17■□□□□ 0.31
GTF3A-201ENST00000381140 ROS1P08922 2347 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 RPL36A-HNRNPH2H7BZ11 118 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 GOSR1O95249 250 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 ALPLP05186 524 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 PGA4P0DJD7 388 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 PGA3P0DJD8 388 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 ACADSP16219 412 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 ACVR1BP36896 505 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 SH3BGRP55822 239 aaPredicted RBP16.99■□□□□ 0.31
GTF3A-201ENST00000381140 PRPS1P60891 318 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 UBE2NP61088 152 aaKnown RBP16.99■□□□□ 0.31
GTF3A-201ENST00000381140 TUBA1BP68363 451 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 TUBA4AP68366 448 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 ANKRD16Q6P6B7 361 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 TUBA1AQ71U36 451 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 HDDC2Q7Z4H3 204 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 C17orf78Q8N4C9 275 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 LRRC75AQ8NAA5 344 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 NOXO1Q8NFA2 376 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 OR9Q2Q8NGE9 314 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 BCL2L2Q92843 193 aaPredicted RBP16.99■□□□□ 0.31
GTF3A-201ENST00000381140 TMEM54Q969K7 222 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 RDH12Q96NR8 316 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 KATNB1Q9BVA0 655 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 NPAP1Q9NZP6 1156 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 PDP1Q9P0J1 537 aaPredicted RBP16.99■□□□□ 0.31
GTF3A-201ENST00000381140 ZNF346Q9UL40 294 aaKnown RBP16.99■□□□□ 0.31
GTF3A-201ENST00000381140 AMDHD2Q9Y303 409 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 SLC25A15Q9Y619 301 aa16.99■□□□□ 0.31
GTF3A-201ENST00000381140 ANKRD17O75179 2603 aaKnown RBP16.98■□□□□ 0.31
GTF3A-201ENST00000381140 SPG11Q96JI7 2443 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 A0A1W2PPR1 153 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 M0R1B8 84 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 TRMUO75648 421 aaKnown RBP16.98■□□□□ 0.31
GTF3A-201ENST00000381140 CCNB2O95067 398 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 NDUFB2O95178 105 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 RPL27P61353 136 aaKnown RBP16.98■□□□□ 0.31
GTF3A-201ENST00000381140 CD47Q08722 323 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 MICAQ29983 383 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 ARMC4Q5T2S8 1044 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 FAHD1Q6P587 224 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 FANK1Q8TC84 345 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 GNPDA2Q8TDQ7 276 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 GIPC3Q8TF64 312 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 TSPAN32Q96QS1 320 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 ESRP2Q9H6T0 727 aaKnown RBP16.98■□□□□ 0.31
GTF3A-201ENST00000381140 SIGLEC7Q9Y286 467 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 ADAM18Q9Y3Q7 739 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 NAV2Q8IVL1 2488 aa16.98■□□□□ 0.31
GTF3A-201ENST00000381140 POLQO75417 2590 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 ZNF99A8MXY4 864 aaPredicted RBP16.97■□□□□ 0.31
GTF3A-201ENST00000381140 DLGAP1O14490 977 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 QDPRP09417 244 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 CAPZA2P47755 286 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 NR1H2P55055 460 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 TAF11Q15544 211 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 PGBD2Q6P3X8 592 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 SEZ6L2Q6UXD5 910 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 ZNF813Q6ZN06 617 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 LINC00471Q8N535 108 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 OR10G2Q8NGC3 310 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 MAGEE2Q8TD90 523 aaPredicted RBP16.97■□□□□ 0.31
GTF3A-201ENST00000381140 HDAC2Q92769 488 aaKnown RBP16.97■□□□□ 0.31
GTF3A-201ENST00000381140 UBTD1Q9HAC8 227 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 TACC2O95359 2948 aa16.97■□□□□ 0.31
GTF3A-201ENST00000381140 DSCAMO60469 2012 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 PTP4A3O75365 173 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 WNT11O96014 354 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 PLAUP00749 431 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 IGHMP01871 453 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 CD3EP07766 207 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 CD14P08571 375 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 B4GALT1P15291 398 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 PRKACGP22612 351 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 FPR3P25089 353 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 LOXP28300 417 aaPredicted RBP16.96■□□□□ 0.31
GTF3A-201ENST00000381140 BSPH1Q075Z2 132 aa16.96■□□□□ 0.31
GTF3A-201ENST00000381140 RFX4Q33E94 735 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms