RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 CCDC3Q9BQI4 270 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 TCF7L1Q9HCS4 588 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 RASL12Q9NYN1 266 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 SPTBN5Q9NRC6 3674 aaKnown RBP15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 CTNSO60931 367 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 NDUFS6O75380 124 aaKnown RBP15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 UBBP0CG47 229 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 UBCP0CG48 685 aaKnown RBP15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 MGMTP16455 207 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 RPS27AP62979 156 aaKnown RBP15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 UBA52P62987 128 aaKnown RBP15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 MPPED2Q15777 294 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 C4orf46Q504U0 113 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 ZNF546Q86UE3 836 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 RCBTB1Q8NDN9 531 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 OR4D10Q8NGI6 311 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 RSC1A1Q92681 617 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 RASD2Q96D21 266 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 SPACA7Q96KW9 195 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 GPR174Q9BXC1 333 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 MOKQ9UQ07 419 aa15.1■□□□□ 0.01
PCDHA1-201ENST00000378133 TMEM272A0A1B0GTI8 110 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 A0A1B0GVT2 93 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 OR2W5A6NFC9 320 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 RFPL4AA6NLU0 287 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 RFPL4AL1F8VTS6 287 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 H0YC42 278 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 GLSO94925 669 aaPredicted RBP15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 ZFPL1O95159 310 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 BTF3P20290 206 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 GGTLC2Q14390 218 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 DND1Q8IYX4 353 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 FRMD1Q8N878 549 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 HOXB13Q92826 284 aaPredicted RBP15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 LMAN2LQ9H0V9 348 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 FAM60AQ9NP50 221 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 MPDZO75970 2070 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 A0A087WV48 116 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 CCDC85CA6NKD9 419 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 H7C417 338 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 TMEM127O75204 238 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 SPI1P17947 270 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 MNDAP41218 407 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 RAB38P57729 211 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 NANOS3P60323 173 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 STAC2Q6ZMT1 411 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 RNF44Q7L0R7 432 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 ZNF550Q7Z398 422 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 STK35Q8TDR2 534 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 LMF2Q9BU23 707 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 SLITRK2Q9H156 845 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 TSPAN10Q9H1Z9 355 aaPredicted RBP15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 LRIT1Q9P2V4 623 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 MTFP1Q9UDX5 166 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 NDRG3Q9UGV2 375 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 ZNF346Q9UL40 294 aaKnown RBP15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 TICRRQ7Z2Z1 1910 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 CEP290O15078 2479 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 VCANP13611 3396 aa15.09■□□□□ 0.01
PCDHA1-201ENST00000378133 C4orf47A7E2U8 309 aa15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 HNRNPA2B1P22626 353 aaKnown RBP15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 ZNF542PQ5EBM4 170 aa15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 KRT77Q7Z794 578 aa15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 SLC43A2Q8N370 569 aa15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 OR51S1Q8NGJ8 323 aa15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 OR6N1Q8NGY5 312 aa15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 OR4C3Q8NH37 302 aa15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 MRPL48Q96GC5 212 aaKnown RBP15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 RBM18Q96H35 190 aaKnown RBP15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 TCEAL2Q9H3H9 227 aaPredicted RBP15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 BARX1Q9HBU1 254 aaPredicted RBP15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 KCNK7Q9Y2U2 307 aa15.08■□□□□ 0.01
PCDHA1-201ENST00000378133 A0A0J9YY10 115 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 F8W036 122 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 EGFP01133 1207 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 CNR1P21554 472 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 ERV3-1Q14264 604 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 MANEAQ5SRI9 462 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 DPY19L2P2Q6ZN68 376 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 MOB3CQ70IA8 216 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 BOLLQ8N9W6 283 aaKnown RBP15.08■□□□□ 0
PCDHA1-201ENST00000378133 TMEM185AQ8NFB2 350 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 RGP1Q92546 391 aaPredicted RBP15.08■□□□□ 0
PCDHA1-201ENST00000378133 ELSPBP1Q96BH3 223 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 CHST6Q9GZX3 395 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 ETV7Q9Y603 341 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 CACNA1CQ13936 2221 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 EML5Q05BV3 1969 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 CACNA1IQ9P0X4 2223 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 A0A087WUJ7 227 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 PRR32B1ATL7 298 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 TGFBR3LH3BV60 316 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 LINC01565O15544 149 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 CSTAP01040 98 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 GPR143P51810 404 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 PGDP52209 483 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 NPSR1Q6W5P4 371 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 DNM1P46Q6ZS02 220 aa15.08■□□□□ 0
PCDHA1-201ENST00000378133 CCDC36Q8IYA8 594 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 181 ms