RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 SLC35B3Q9H1N7 401 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TMPRSS12Q86WS5 348 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SAXO1Q8IYX7 474 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TBC1D24Q9ULP9 559 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SUSD1Q6UWL2 747 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 Q7L0L9 218 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 OR2A1Q8NGT9 310 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 RTL8AQ9BWD3 113 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 FTSJ1Q9UET6 329 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 CLEC12AQ5QGZ9 265 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 C9orf40Q8IXQ3 194 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SLC30A7Q8NEW0 376 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 BAHD1Q8TBE0 780 aaPredicted RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SYNPRQ8TBG9 265 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 GLIPR2Q9H4G4 154 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MFNGO00587 321 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SIAH3Q8IW03 269 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 DLL4Q9NR61 685 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 OR6C6A6NF89 314 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 AK4P27144 223 aaPredicted RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 BSGP35613 385 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ACOT6Q3I5F7 207 aaPredicted RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 PGBD5Q8N414 524 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 FAM83FQ8NEG4 500 aaPredicted RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 OR14L1PQ8NHC6 308 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 IL22RA2Q969J5 263 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 LIN28AQ9H9Z2 209 aaKnown RBP4.53□□□□□ -1.68
PCDH9-201ENST00000377861 A0A0U1RQV5 110 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TGM5O43548 720 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MC1RQ01726 317 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 RIPPLY2Q5TAB7 128 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 UBAC2Q8NBM4 344 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 PLEKHF2Q9H8W4 249 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 MCRIP1C9JLW8 97 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 SGSHP51688 502 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 TMEM211Q6ICI0 200 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF615Q8N8J6 731 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 OR51A7Q8NH64 312 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 FBP1P09467 338 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 AMY2BP19961 511 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 AKR1E2Q96JD6 320 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 CHRNB1P11230 501 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 CTSSP25774 331 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 GPR18Q14330 331 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ZIC1Q15915 447 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 ZNF627Q7L945 461 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 OR51A4Q8NGJ6 313 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 DIO2Q92813 273 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 VNN3Q9NY84 501 aa4.53□□□□□ -1.68
PCDH9-201ENST00000377861 VIRMAQ69YN4 1812 aaKnown RBP4.53□□□□□ -1.69
PCDH9-201ENST00000377861 WNT7BP56706 349 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 TEX37Q96LM6 180 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 OPN4Q9UHM6 478 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 MED16Q9Y2X0 877 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 MRPS18CQ9Y3D5 142 aaKnown RBP4.52□□□□□ -1.69
PCDH9-201ENST00000377861 A0A0A6YYJ9 748 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 CBR3O75828 277 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 TCN2P20062 427 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 BPIFCQ8NFQ6 507 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 YIPF5Q969M3 257 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 ARSGQ96EG1 525 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 NCDNQ9UBB6 729 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 LAP3P28838 519 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 CTXN1P60606 82 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 COX14Q96I36 57 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 C4orf36Q96KX1 117 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 SLAMF8Q9P0V8 285 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 A4GNTQ9UNA3 340 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 ALG1L2C9J202 215 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 SLC25A42Q86VD7 318 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 CACUL1Q86Y37 369 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 PTBP3O95758 552 aaKnown RBP4.52□□□□□ -1.69
PCDH9-201ENST00000377861 FOXA1P55317 472 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 WDR74Q6RFH5 385 aaPredicted RBP4.52□□□□□ -1.69
PCDH9-201ENST00000377861 GPRIN1Q7Z2K8 1008 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 ZNF551Q7Z340 670 aaPredicted RBP4.52□□□□□ -1.69
PCDH9-201ENST00000377861 NMNAT2Q9BZQ4 307 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 TREM2Q9NZC2 230 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 ACP5P13686 325 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 SQSTM1Q13501 440 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 FZD2Q14332 565 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 APOOLQ6UXV4 268 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 RBM7Q9Y580 266 aaKnown RBP4.52□□□□□ -1.69
PCDH9-201ENST00000377861 IER3IP1Q9Y5U9 82 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 NPTNQ9Y639 398 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 PRDX3P30048 256 aaKnown RBP4.52□□□□□ -1.69
PCDH9-201ENST00000377861 CDONQ4KMG0 1287 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 MAMSTRQ6ZN01 415 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 OR2G2Q8NGZ5 317 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 SDSLQ96GA7 329 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 RBMX2Q9Y388 322 aaKnown RBP4.52□□□□□ -1.69
PCDH9-201ENST00000377861 FUT6P51993 359 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 MMP21Q8N119 569 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 IFT22Q9H7X7 185 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 HSF4Q9ULV5 492 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 ICAM5Q9UMF0 924 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 TRAV9-1A0A075B6T8 112 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 TLCD2A6NGC4 264 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 SPDEFO95238 335 aa4.52□□□□□ -1.69
PCDH9-201ENST00000377861 AMY2AP04746 511 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms